DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and gpcpd1

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_021324084.1 Gene:gpcpd1 / 492483 ZFINID:ZDB-GENE-060503-472 Length:727 Species:Danio rerio


Alignment Length:719 Identity:185/719 - (25%)
Similarity:300/719 - (41%) Gaps:153/719 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EYVAISGNCPSLGNWDPKEVYILAKNDCISCLCNCRQFEASLEIPRNIDIHYRY--CVVIHDPET 118
            |.:|:.|:|.:||:|..::...|...:....|     :..::.:||..:..|||  ..::.....
Zfish    79 EVIAVVGSCETLGSWCQQKAVTLQPAEEDGTL-----WRTTIHVPRGAETKYRYFKAFILESKNA 138

  Fly   119 D---EVYIRFWESQLYPRVIRTCQNMLKNCDVFGKPHDDDEANQVDRGWATTETIVHLKI---FN 177
            .   :|.:..||:...||.:...:..|...|.....||..|.  ||.||.|.:|.:.|::   ..
Zfish   139 GGPCQVIVNRWETHQLPRSLSPSEPELVVDDGHFGVHDGAEC--VDSGWLTCQTEIRLRLHYSVK 201

  Fly   178 APFCWQRQKPRLLYVHVQPMFEVPENPCNEPANPIKMVSSQTRLSRYLSTREIKAGNQYLQLAQV 242
            .|....::|.:.....::.|.|..|....|..:|    ||..:::..|....|.......:.:|.
Zfish   202 PPVSITKKKFKTSRFRLKLMLEGVEEEEEEEESP----SSWHKMTTTLEMSMISDDGYKSRHSQP 262

  Fly   243 EVTNLCVQNALAAQQRFGARCG-----------------PKDMELFHCSIAFPEETLYRLDLYTY 290
            |                   ||                 |.::.|   :..|.||.|....:...
Zfish   263 E-------------------CGYALEPSRWTEYTIHTMDPDNLVL---TFEFFEEDLSETVVQGD 305

  Fly   291 AHKAGYDEPPYHYGYGFLMPDQLL--GTE-GSARVKITCASTHRPLMEMCVRYLIIRPLPNFRCD 352
            ||       |.|.|...|:....:  |.: |...:.|...::.:.|.::.|.||:.||:...:||
Zfish   306 AH-------PGHVGTACLLSSSFVESGKDLGVVTLPIMSRNSRQTLGKVRVDYLVTRPIQGLQCD 363

  Fly   353 LSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQV 417
            :|.|:.:|||| |..:::||:|:|:|:......:||||:..|..|....|..||.||.|::|...
Zfish   364 MSRSFTKYWRK-RSALDVGHRGAGSTHAAKHHKIRENTIASFLSAANHGAAYVEFDVHLSKDLVP 427

  Fly   418 VVYHDFVLRFMLQRMPSFEDLLENQDLLIFAYENLNKLMLLAMGGSKRKD-----LIAVPLEAFS 477
            |||||                                 :...:...|:.|     |..||::..:
Zfish   428 VVYHD---------------------------------LTCCISTKKKNDKTSMLLFEVPVKDLT 459

  Fly   478 YDQLKEVKVLRFAGSKGCD-------KSCDRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQ 535
            :|||   ::|:.|.:...|       :..:..:.|.:|||.|..:.  :::|.::||.||:||..
Zfish   460 FDQL---QLLKLAHTTALDTHDHKDLQDEEEYIDEHQPFPSLPQIF--QSVPENVGFNIELKWIS 519

  Fly   536 MTNMRRWESGSFKPTFDRNFYVDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLE 600
            ......|:: :....|:.|.::|.||..||..||.|||:|..||.|:|.|||.|||.||:..|.:
Zfish   520 QFKDGSWDA-NLSTYFNMNQFLDIILTCVLQNAGNRRIIFSCFDPDVCTMVRQKQNKYPILFLTQ 583

  Fly   601 D-----PHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFVYGS 660
            .     |    :..|.|.....:|:.|..|...||::.|.:.||.....:.......|..|.:|.
Zfish   584 GVTQLYP----ELMDIRCQSTKIAMSFAQSENILGISAHTDELLKNMEFIGEAQSKGLVVFCWGD 644

  Fly   661 STIDLEIRNKLKKHGVLGIIYDRL--DQLDQVG----EELEGDTMCTIDSVTTRRVIQETEVEEW 719
            ...|.|.|.||::||:.|:||||:  |:|:|..    ||..|:                  ::|.
Zfish   645 YNNDHENRRKLREHGIDGLIYDRICEDKLEQSNIFKMEEQGGN------------------LKEV 691

  Fly   720 IQKC 723
            ||.|
Zfish   692 IQTC 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888 26/112 (23%)
GDPD_GDE5 368..684 CDD:176549 98/332 (30%)
GDPD 372..685 CDD:281062 98/331 (30%)
gpcpd1XP_021324084.1 CBM20_Prei4 65..186 CDD:99888 27/113 (24%)
GDPD_GDE5 378..668 CDD:176549 98/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596782
Domainoid 1 1.000 59 1.000 Domainoid score I10647
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10478
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184242at33208
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - otm25676
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1268
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.810

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