DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and CG11619

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_649081.1 Gene:CG11619 / 40072 FlyBaseID:FBgn0036836 Length:699 Species:Drosophila melanogaster


Alignment Length:697 Identity:178/697 - (25%)
Similarity:295/697 - (42%) Gaps:168/697 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PFCVVFHSSLNGN------EYVAISGNCPSLGNWDPKEVYILAKNDCISC-------LCNCRQFE 94
            |...:|...|..|      |:||:||:.|:||.|..::...|.:.|....       :|..::| 
  Fly    71 PLFRIFSLELRHNIRLAPDEFVAVSGDHPALGLWQLEKALPLKEQDKARTKWYLRVWICASQRF- 134

  Fly    95 ASLEIPRNIDIHYRYCVVIHDPETDEVYIRFWESQLYPRVIRTCQ-NMLKNCDVFGK--PHDDDE 156
                       :|||.:...:.:.:.| :|.||.|...|:::|.: ......|:||:  |.....
  Fly   135 -----------YYRYLIYSKNRQGNRV-LRTWEGQRVARMLQTYEIYRSPGLDIFGEAYPVSVGG 187

  Fly   157 ANQVDRGWATTETIVHLKIFNAPFCWQ----------RQKPRLLYVHVQPMFEVPENPCNEPANP 211
            ...::|||...|.::.||     |.||          ..|.||:                  ..|
  Fly   188 GFYLERGWLQYEYVIELK-----FVWQDHIAISGMGSNAKYRLI------------------LTP 229

  Fly   212 IKMV-SSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQNALAAQQRFGARCGPKDMELFHCSI 275
            :.:: .::..:|||       |.|               |::...|.:.|.|.....:.:|.  |
  Fly   230 LNLIDDTRIEVSRY-------AYN---------------QSSFRPQNQRGVRYTQGTIVVFR--I 270

  Fly   276 AFPEETLYRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRY 340
            ..|.:|...|.|..|  :|..| .....|..::.|||:.|:.|..::.|..:..:..:.|:.:.|
  Fly   271 YQPLDTYNALRLSIY--QASRD-LQLSLGEAYIFPDQIKGSRGILQLPIFASLQNLAIGEITLPY 332

  Fly   341 LIIRPLPNFRC-DLSHSYERYWRKNRLCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADM 404
            |:::|:|.... :|..|:..||..|...:::|::|.|.:|...|..:.|||:..:...:.|..||
  Fly   333 LVVQPMPKVEAGNLRASFHHYWPDNWPTLDVGYRGLGASYFQSSTSLTENTIESYLAVLKAKGDM 397

  Fly   405 VEMDVQLTQDAQVVVYHD---------------FVLRFMLQRMPSFEDLLENQDLL-----IFAY 449
            |::|||||:|...||:|.               |.|||:|.|..::.:|..::..:     :..|
  Fly   398 VQLDVQLTKDYVPVVWHGFGFYTSDTDRSVRDRFDLRFVLIRELTYSELKASRVFILKRWTVQEY 462

  Fly   450 ENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCDRMLLEQRPFPLLLD 514
            .|||                           :|:|.                  .:.|.||.|.:
  Fly   463 TNLN---------------------------VKDVS------------------QKHRIFPKLSE 482

  Fly   515 LLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPT--FDRNFYVDTILEIVLNKAGKRRIVFCS 577
            :.  |.||..:|.|:||||||:     ..||..:.|  .::|.|||.||:|.::....|.::|.|
  Fly   483 VF--EALPKTLGLLVEIKWPQI-----MASGVPESTQSLNKNIYVDRILQITIHHGCGRPLIFAS 540

  Fly   578 FDADICAMVRFKQNVYPVTLLLEDPHSPV--QYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLN 640
            ||||||.|:|.||:|:|| :|:....|.:  :|.|.|......|:.|..|.|.||..||..:..|
  Fly   541 FDADICTMIRLKQHVFPV-ILMSIGKSQIWDEYMDLRAQSFQQAINFVQSAEILGTALHVENFQN 604

  Fly   641 KPSTMAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRLDQL 687
            |...:.....:....|::|:...|..:..:.:...|.|:|||.:|::
  Fly   605 KHQQVNLALDLQQSLFLWGNDMQDEHLLEQFRALDVTGLIYDHMDRV 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888 31/135 (23%)
GDPD_GDE5 368..684 CDD:176549 98/339 (29%)
CG11619NP_649081.1 CBM20_Prei4 69..196 CDD:99888 33/137 (24%)
GDPD_GDE5 361..648 CDD:176549 98/339 (29%)

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