DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and Gdpd2

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001100414.1 Gene:Gdpd2 / 302421 RGDID:1560780 Length:538 Species:Rattus norvegicus


Alignment Length:390 Identity:76/390 - (19%)
Similarity:128/390 - (32%) Gaps:171/390 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 IGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPS 434
            :||:|:       ..:..||||...::.....|.:.|.||.::.|....:.||            
  Rat   227 VGHRGA-------PMLAPENTLMSLRKTAECGAAVFETDVMVSSDGVPFLMHD------------ 272

  Fly   435 FEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSC 499
                           |.|::...:|   |...:.|:.....||:.:|:::.    ||:       
  Rat   273 ---------------ERLSRTTNVA---SVFPERISAHSSDFSWAELQKLN----AGT------- 308

  Fly   500 DRMLLEQRPF-------------------PLLLDLLDEE---NLPVDMGFLIEIKWPQMTNMRRW 542
              ..||:|||                   |.|.::|.|.   ||.|            |.::|| 
  Rat   309 --WFLERRPFWGAKKLSGSDQKEAGNQTVPALEEVLKEAATLNLSV------------MFDLRR- 358

  Fly   543 ESGSFKPTFDRNFY---VDTILEIVLNKAGKRRIVFCSFDADICAMVRFKQNVYPVTLLLEDPHS 604
                  |..:..:|   |:..:|.||:.:..:.:|                      |.|.|   
  Rat   359 ------PPRNHTYYDTFVNQTVEAVLSASVPQAMV----------------------LWLPD--- 392

  Fly   605 PVQYADQRVSVQDVAVRF--------CNSLE---FLGLTLHANSLLNKPSTMAYLHQINLDAFVY 658
                 :.|.:||..|.|.        .|..|   ||.|......:|:    :..|||.|:     
  Rat   393 -----EDRATVQQRAPRMRQIYGYRGSNGTERPQFLNLPYQDLPVLD----IKALHQDNV----- 443

  Fly   659 GSSTIDLEIRNKLKKHGVLGIIYDRLDQLDQVGEELEGDTMCT-IDSVTTR--RVIQETEVEEWI 720
               :::|.:.||.....:|                     .|. :|||||.  :::|:.:...|:
  Rat   444 ---SVNLFVVNKPWLFSLL---------------------WCAGVDSVTTNDCQLLQQMQYPLWL 484

  Fly   721  720
              Rat   485  484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 68/349 (19%)
Gdpd2NP_001100414.1 PI-PLCc_GDPD_SF 198..499 CDD:472694 76/390 (19%)
Blue background indicates that the domain is not in the aligned region.

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