DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3942 and GDPD1

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_872375.2 Gene:GDPD1 / 284161 HGNCID:20883 Length:314 Species:Homo sapiens


Alignment Length:352 Identity:68/352 - (19%)
Similarity:121/352 - (34%) Gaps:120/352 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 RKNR-LCMNIGHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVL 425
            :|.| |..:|.|:|       |:....|||:..|:.||....||:|:|..:|:|.||||.||   
Human    34 KKQRFLSKHISHRG-------GAGENLENTMAAFQHAVKIGTDMLELDCHITKDEQVVVSHD--- 88

  Fly   426 RFMLQRMPSFEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLK------EV 484
                                    |||           ||...:.|.:....|.:|.      :|
Human    89 ------------------------ENL-----------KRATGVNVNISDLKYCELPPYLGKLDV 118

  Fly   485 KVLRFAGSKGCDKSCDRMLLEQRPFPLLLDLLDE-ENLPVDMGFLIE-----------IKWPQMT 537
            ...|....:|.|..          .|||.::.:. .|.|:::...:.           :|.....
Human   119 SFQRACQCEGKDNR----------IPLLKEVFEAFPNTPINIDIKVNNNVLIKKVSELVKRYNRE 173

  Fly   538 NMRRWESGSF---KPTFDRNFYVDTI--LEIVLNKAGKRRIVFCSFDADICAMVRFKQNVY---- 593
            ::..|.:.::   :..:..|..:..:  |:.||       ::...|...:...|..::..:    
Human   174 HLTVWGNANYEIVEKCYKENSDIPILFSLQRVL-------LILGLFFTGLLPFVPIREQFFEIPM 231

  Fly   594 -PVTLLLEDPHSPVQYADQRVSVQDVAVRFCNSLEFL----GLTLHANSL---LNKPSTMAYLHQ 650
             .:.|.|::||:                 ...|.:||    .|.|...:|   |.......|:..
Human   232 PSIILKLKEPHT-----------------MSRSQKFLIWLSDLLLMRKALFDHLTARGIQVYIWV 279

  Fly   651 INLD-----AFVYGSSTIDLEIRNKLK 672
            :|.:     ||..|::.:..:...||:
Human   280 LNEEQEYKRAFDLGATGVMTDYPTKLR 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 65/345 (19%)
GDPD1NP_872375.2 GDPD_GDE4 14..311 CDD:176553 68/352 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.