DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and gde1

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_594131.1 Gene:gde1 / 2543677 PomBaseID:SPAPB1E7.05 Length:1076 Species:Schizosaccharomyces pombe


Alignment Length:708 Identity:162/708 - (22%)
Similarity:259/708 - (36%) Gaps:200/708 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SLNGNEYVAISGNCPSLGNWDPKEVYI-------LAKNDCISCLCNCRQFEAS-------LEIPR 101
            ||.|::.|.:||..||.....|..|..       |:|||  :...|.....:|       ::|||
pombe   508 SLQGDDAVYVSGRSPSFAASRPSSVDFMSQSTDSLSKND--TTASNGSMTPSSSQNNSVIIDIPR 570

  Fly   102 NIDIHY----RYCVV-IHDPE---TDEVYIRFWESQLYPRVIRTCQNMLKNCDVFGKPHD----- 153
            :   |:    ..|:. :.:|:   .|.:::.:..:|         :|..:..:....|::     
pombe   571 S---HFDNAGEVCLENLAEPDEIADDSIHLHYDAAQ---------ENSPQPVNGSSPPYELVFVT 623

  Fly   154 --DDEANQVDRGWATTETIVHL-----KIFNAPFCWQRQKPRLLYVHVQPMFEVPENPCNEPANP 211
              .:||         |.||..|     ||.....|........|..|:|.:         :|..|
pombe   624 RNTEEA---------TITIDLLANRSHKILGRTVCCLTSLVSDLGNHMQSL---------KPLAP 670

  Fly   212 IKMVSSQTRLSRYLSTREIKAGNQYLQLAQVEVTNLCVQNALAAQQRFGARCGPKDMELFHCSIA 276
            :.::||:|       .:.|...|..:.:::|.|           ..||.:..|          |:
pombe   671 LPLLSSKT-------LKPIAHVNADVLISKVTV-----------DDRFSSNDG----------IS 707

  Fly   277 FPEETLYRLDLYTYAHKAGYDEPPYHYGYGFLMPDQLLGTEGSARVKITCASTHRPLMEMCVRYL 341
            .|                                  .|..|..:.|..|......          
pombe   708 TP----------------------------------ALSLEAVSNVSRTALEDAE---------- 728

  Fly   342 IIRPLPNFRCDLSHSYERYWRKNRLCMNIGHKGSGN------TYRLGSDVVRENTLYGFKQAVLA 400
              |.|.......|.|    .:.|.:.: |||:|.|.      :.:||     ||||..|.:|...
pombe   729 --RSLHKSATTTSES----GKSNGVAV-IGHRGLGKNQPDRLSLQLG-----ENTLQSFIKAADL 781

  Fly   401 NADMVEMDVQLTQDAQVVVYHDFVL---------------RFM-LQRMPSFEDLLENQDLLIFAY 449
            .|..||:|||:|:|...||||||::               :|: ....|| |::.::      |.
pombe   782 GASYVELDVQMTKDMVPVVYHDFIVNETGTDAQVHSLTLEQFLGASHSPS-EEIKDD------AS 839

  Fly   450 ENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCDRMLLEQRPFPLLLD 514
            :...|....|...|.......|....|:.:..: :|...:.|:......|       .||..|.|
pombe   840 DIQQKRRPRAYSSSFTPSGSQVNFGEFAEENAR-LKPKVYKGNALGHTIC-------APFTTLKD 896

  Fly   515 LLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKP-TFDRNFYVDTILEIVLNKAGKRRIVFCSF 578
            :|.|  :|..:|..:|.|:|.::..   |.....| .:|.||||||||.|:....|||:.:|.||
pombe   897 VLKE--VPQSVGLNVEFKYPMLSEA---EEEKLLPIAYDYNFYVDTILSIIKKYGGKRKYIFSSF 956

  Fly   579 DADICAMVRFKQNVYPVTLLLEDPHSPVQYADQRVSVQDVAVRFCNSLEFLGLTLHANSLLNKPS 643
            :.|||.::..| :..||..|.|.  ......|.|.:....|::|.:...|||:......|:..|.
pombe   957 NPDICILLSLK-STNPVLFLTEG--GTAYRTDVRAASLRQALKFASQWSFLGIVSACEPLIMCPR 1018

  Fly   644 TMAYLHQINLDAFVYGSSTIDLEIRNKLKKHGVLGIIYDRL----DQLDQVGEELEGD 697
            .:..:.|:.|..:.||....|::...:..:.||..:|.|.:    ..|:|..|.||.|
pombe  1019 LIKAVKQLGLSCYTYGVLNNDVDNVRRQVRFGVDAVIVDNVLAIRRALNQYDESLESD 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888 28/141 (20%)
GDPD_GDE5 368..684 CDD:176549 95/338 (28%)
GDPD 372..685 CDD:281062 93/339 (27%)
gde1NP_594131.1 SPX <1..84 CDD:269894
ANK repeat 298..323 CDD:293786
ANK 336..453 CDD:238125
ANK repeat 336..364 CDD:293786
Ank_2 337..431 CDD:289560
ANK repeat 366..397 CDD:293786
ANK repeat 399..431 CDD:293786
GDPD_YPL110cp_fungi 746..1068 CDD:176548 96/350 (27%)
GDPD 752..1059 CDD:281062 93/334 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 133 1.000 Domainoid score I1291
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001717
OrthoInspector 1 1.000 - - otm46993
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1268
TreeFam 1 0.960 - -
87.870

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