DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and GDPD4

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_011543136.1 Gene:GDPD4 / 220032 HGNCID:24849 Length:649 Species:Homo sapiens


Alignment Length:318 Identity:67/318 - (21%)
Similarity:117/318 - (36%) Gaps:112/318 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 GHKGSGNTYRLGSDVVRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVLRFMLQRMPSF 435
            ||:|:.   .||.    |||:..|::||...|..:|.|:.|:.|....:.|||.|:    |..:.
Human   228 GHRGAP---MLGP----ENTMMSFEKAVEHGAHGLETDIHLSYDHVPFLMHDFDLK----RTTNI 281

  Fly   436 -----EDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGC 495
                 |...||.     |:.|.:.|..|..|    |..:...|..| |:    :|.|        
Human   282 GEVQPESACENP-----AFFNWDFLSTLNAG----KWFVKPELRPF-YN----MKPL-------- 324

  Fly   496 DKSCDRMLLEQRPFPLLLDLL---DEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPTFD----- 552
             ...|:.....:..|.|.|||   ::|.     .|:|                     ||     
Human   325 -SEADKERARNQSIPTLADLLTLAEKER-----KFVI---------------------FDLHRPP 362

  Fly   553 -----RNFYVDTILEIVLNKAGKRRIVFC--SFDADICAMVRFKQNVYPVTLLLEDPHSPVQYAD 610
                 |:.:|..::.::|....::.::|.  :.|.      ::.::|.|          ..|:..
Human   363 PKHPLRHTFVRQVVSVILASKIEQHLIFWLPAHDR------QYVRSVAP----------GFQHVG 411

  Fly   611 QRVSVQDVAVR------------FCNSL-EFLGLTLHAN-SLLNKP--STMAYLHQIN 652
            :.||::.:|..            |.|.| ::....:|.| ..:|:|  .::|:..:||
Human   412 RLVSIETLAKNNISIINVDYKKLFPNGLRDYKAANIHINVYTVNEPWLFSLAWCSRIN 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 67/318 (21%)
GDPD 372..685 CDD:281062 66/317 (21%)
GDPD4XP_011543136.1 PI-PLCc_GDPD_SF 205..517 CDD:301322 67/318 (21%)
UgpQ 223..482 CDD:223657 67/318 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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