DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and T09B9.3

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_509638.2 Gene:T09B9.3 / 188321 WormBaseID:WBGene00011644 Length:340 Species:Caenorhabditis elegans


Alignment Length:163 Identity:38/163 - (23%)
Similarity:59/163 - (36%) Gaps:71/163 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 VRENTLYGFKQAVLANADMVEMDVQLTQDAQVVVY------------------------------ 420
            |.:||:..|:||....||.:.|||::|:|..::|.                              
 Worm    78 VHKNTIPAFRQAKQNGADTIVMDVRMTKDGMLIVLLPDSVDTDNATYIVDETHWIQMSQLNVYGG 142

  Fly   421 -HDFVLRF-------------MLQRMPSFEDLLENQDLLIFAYENLNKLMLLAMGGSKRKDLIAV 471
             :..:|.|             |:..:|||     :.|||.:.   .||:|..::     .|.:||
 Worm   143 NNGTILTFDEAVSWCEANKMNMIWHIPSF-----SSDLLTYL---RNKIMQDSL-----YDKVAV 194

  Fly   472 PLEAFSYDQLKEVKVLRFAGSKGCDKSCDRMLL 504
            .    :|:       |..||...|   .||.||
 Worm   195 T----TYN-------LIAAGRIRC---TDRQLL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 38/163 (23%)
GDPD 372..685 CDD:281062 38/163 (23%)
T09B9.3NP_509638.2 GDPD_GDE1 67..314 CDD:176515 38/163 (23%)
GDPD 81..311 CDD:281062 37/160 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0584
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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