DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and T12B3.3

DIOPT Version :10

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_501176.1 Gene:T12B3.3 / 177509 WormBaseID:WBGene00020446 Length:356 Species:Caenorhabditis elegans


Alignment Length:290 Identity:62/290 - (21%)
Similarity:100/290 - (34%) Gaps:119/290 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 YLIIRP----LPNFRCDLSHSYERYWRKNRLC--MNI----------GHKGSGNTYRLGSDVVRE 388
            |||..|    :|     ||.....|..||..|  .|:          ||:|:..::       .|
 Worm    25 YLIYPPGLLLIP-----LSLFIFSYTTKNEKCSSKNVDTFFSGFKIGGHRGAPKSF-------PE 77

  Fly   389 NTLYGFKQAVLANADMVEMDVQLTQDAQVVVYHDFVL--------------RFML---------- 429
            |::.||.||....||::|.||.||:|.:.|:.||..|              |..|          
 Worm    78 NSMAGFAQAKADGADLIEFDVALTKDGKAVLMHDDDLDRTTDMKGPIRDKTRAELDRCDISATFK 142

  Fly   430 ---------------QRMPSFEDL----LENQDLLIF------------------AYENLNKLML 457
                           :|:|..||:    :||...::|                  .|...:|.::
 Worm   143 RTAPGDHCRLATVSRERVPDMEDVVKWAVENNTRMLFDVKDSDNELVDQIANLFQKYNLYDKAIV 207

  Fly   458 ----------LAMGGSKRKDLIAVPLEAFSYDQLKEVKVLRFAGSKGCDKSCDRMLLEQ------ 506
                      :..|..|....:...|:.:||..::.::. |::|.|       :||.|.      
 Worm   208 CSFFPWVVYRIKKGDQKILTGLTWRLKFWSYHDIENIRP-RYSGPK-------QMLFEMIDVAHV 264

  Fly   507 ------RPFPLLLDLLDEENLPVDMGFLIE 530
                  .|:.|..|||...||.:....:::
 Worm   265 WLLKKVTPWYLGADLLLTNNLDISQALIMD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 51/256 (20%)
T12B3.3NP_501176.1 GDPD_GDE1 65..329 CDD:176515 50/245 (20%)
Blue background indicates that the domain is not in the aligned region.

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