DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3942 and LOC100334642

DIOPT Version :9

Sequence 1:NP_650171.2 Gene:CG3942 / 41489 FlyBaseID:FBgn0038008 Length:739 Species:Drosophila melanogaster
Sequence 2:XP_002661335.4 Gene:LOC100334642 / 100334642 -ID:- Length:393 Species:Danio rerio


Alignment Length:352 Identity:68/352 - (19%)
Similarity:130/352 - (36%) Gaps:94/352 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 DLLENQDLLIFAYEN---LNKLMLLAMGGSKRKDLIAVPLEAFSYDQLKE---VKVLRFAGSKGC 495
            :||.:...|...|::   .:.|...|:.|:  .:|:::.|||.:...:|:   ::.|.:|..:| 
Zfish     9 ELLGSTKRLNINYQDPDGFSSLHHAALTGT--TELLSLLLEAQAVVDIKDSNGMRPLHYAAWQG- 70

  Fly   496 DKSCDRMLLEQRPFPLLLDLLDEENLPVDMGFLIEIKWPQMTNMRRWESGSFKPTFDRNFYVDTI 560
              ..|.:|:..|....:.....:..:|:.:..               :.|.::.:       :.:
Zfish    71 --KADSVLMLLRSGAAVNSASHDGQIPLHLAA---------------QYGHYEVS-------EML 111

  Fly   561 LE-----IVLNKAGKRRI-VFCSFDADICAMVRFKQNVYPVTLLLE---------DPHSPVQYAD 610
            |:     .|||||.|..: :.|.|.....|.:....|:  |..|||         :.::|:..| 
Zfish   112 LQHQSNPCVLNKAKKTPLDLACEFGRAKVAQLLLSSNM--VASLLEGDRRDASDSNCNTPLHLA- 173

  Fly   611 QRVSVQDVAVRF-------CNSLEFLGLTLHANSLLNKPSTMAYLHQINLDAFV---YGSSTIDL 665
            .|...:|| :|.       .|.....|..||..:|..|...:..|....:|..:   |..:.:|:
Zfish   174 ARNGHKDV-IRLLLKAGIDINRTTKAGTALHEAALYGKTEVVRLLLDTGIDVNIRNTYNQTALDI 237

  Fly   666 -----------EIRNKLKK-HGVLGIIYDRLDQLDQVGE--ELEGDTMCTIDSVTTRRVIQETEV 716
                       :|:..|:: .|||        |:..:.:  .|...|..||.:.....||::...
Zfish   238 VNQFTACHASKDIKQLLREATGVL--------QVRALKDFWNLHDPTALTIRAGDVITVIEQHVD 294

  Fly   717 EEW----------IQKCGYKPETSIVV 733
            ..|          ..:.||.|.:.:.|
Zfish   295 GRWKGHIHDTQRGTDRIGYFPPSIVEV 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3942NP_650171.2 CBM20_Prei4 44..164 CDD:99888
GDPD_GDE5 368..684 CDD:176549 56/289 (19%)
GDPD 372..685 CDD:281062 56/290 (19%)
LOC100334642XP_002661335.4 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D687958at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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