DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a3 and Cyp4f40

DIOPT Version :9

Sequence 1:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_038935701.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:530 Species:Rattus norvegicus


Alignment Length:522 Identity:137/522 - (26%)
Similarity:208/522 - (39%) Gaps:110/522 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLAVGVCFW-------IYFLWS------------RRRLYMMHFKIPGPMGLPILGIAFEYLITY 51
            ||..|||.::       ||.|::            :|..:..|..:..|.               
  Rat    21 LLSLVGVSWFLTRCLTQIYTLYAKCQRLCGFPQPPKRSWFWGHLGMSPPT--------------- 70

  Fly    52 KRKMSIRTKYMDIYGSTCLVWVGP-TPFVITRDPKIAEEIF-LSPECLNRSSIFSKPVNSCTGDG 114
            :..|...|:.:..|....:.|:|| .|.:....|.|...:. .|.....:..||...:....|||
  Rat    71 EEGMKQMTELVATYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYSFLKPWLGDG 135

  Fly   115 LLSLEASKWVDRRKNLNPAFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEKKVRDDIVRWSFRI 179
            ||...:.||...|..|.|||..|:|..::.|||.....:.|....|...|...:  |:    |..
  Rat   136 LLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHL--DM----FEN 194

  Fly   180 ATQTTVGTDVKKDASFKNDSVLKSYETFMKIIVMNVLL--------------------------- 217
            .:..|:.|..|...||.::...|..|....|:.::.|:                           
  Rat   195 ISLMTLDTLQKCVFSFNSNCQEKPSEYIAAILELSALVVKRNEQLLLHMDLLYRLTPDGRRFYKA 259

  Fly   218 -PFTHNKIFSTL----------GGFETQKALAKSNVNKMIGTIVDKKLMTKPESGSQPEITSVIN 271
             ...|:..::.:          ||.:..||.|||.....|    |..|::|.|.|.         
  Rat   260 CHLVHDFTYAVIQERRRTLPKHGGDDVIKAKAKSKTLDFI----DVLLLSKDEDGK--------- 311

  Fly   272 KAIELHRNGEMSREEVQSECCSFVVAAFETTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGD 336
                     |:|.|::::|..:|:....:||...:...|..||..||:|:...||::||......
  Rat   312 ---------ELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDS 367

  Fly   337 FEV-------TYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIF 394
            .|:       ..|||.::.||...:.|:|||.|.|....|...:|..|..|.|||||:...|:||
  Rat   368 EEIECSCGVLLRDDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRVIPKGIICIINIF 432

  Fly   395 ATHRNRDHWGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRNC 459
            |||.|...| .||..::|..|.|:|::.|.|.|:||||.|.|||||..:.:...|:|::..|...
  Rat   433 ATHHNPTVW-QDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRF 496

  Fly   460 KV 461
            :|
  Rat   497 RV 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a3NP_650170.2 p450 33..463 CDD:299894 127/476 (27%)
Cyp4f40XP_038935701.1 CYP4F 74..522 CDD:410772 126/454 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.