DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a3 and shd

DIOPT Version :9

Sequence 1:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001261843.1 Gene:shd / 39592 FlyBaseID:FBgn0003388 Length:540 Species:Drosophila melanogaster


Alignment Length:567 Identity:110/567 - (19%)
Similarity:206/567 - (36%) Gaps:153/567 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLAVGVCFWIYFLWSRRRLYMMHFK-------------------------------IPGPMGLP 39
            ||||:.:....|....|.:|..::.:                               ||||..:|
  Fly     5 LLLALALVLGCYCALHRHKLADIYLRPLLKNTLLEDFYHAELIQPEAPKRRRRGIWDIPGPKRIP 69

  Fly    40 ILGIAFEYLITYKR-KMS-IRTKYMDI---YGSTCL-VWVGPTPFVITRDPKIAEEIFLSPE--- 95
            .||..:.:|:.::| ||: :...|.|:   ||...| |.....|.|...:....|::...|.   
  Fly    70 FLGTKWIFLLFFRRYKMTKLHEVYADLNRQYGDIVLEVMPSNVPIVHLYNRDDLEKVLKYPSKYP 134

  Fly    96 --------CLNRSSIFSKPVNSCTGDGLLSLEASKWVDRRKNLNPAF-KQNVLLSFLPIFNSEAK 151
                    .:.|.   |:| :.....|:::.:...|...|.:|..:. ...||.:|||..|:...
  Fly   135 FRPPTEIIVMYRQ---SRP-DRYASVGIVNEQGPMWQRLRSSLTSSITSPRVLQNFLPALNAVCD 195

  Fly   152 TLVAFL------DSLVGQGEKKVRD----DIV-------RWSFRIATQTTVGTDVKKDASFKNDS 199
            ..:..|      |:||....:::.:    :.|       |..| :|..|.....:.:.|:.....
  Fly   196 DFIELLRARRDPDTLVVPNFEELANLMGLEAVCTLMLGRRMGF-LAIDTKQPQKISQLAAAVKQL 259

  Fly   200 VLKSYETFMKIIVMNVLLPFTHNKIFSTLGGFETQKALAKSN--VNKMIGTIVDKKLMTKPESGS 262
            .:...:::..:.:.         |.|.|    :|.:..|::.  :..:|..|:|.:|....:|.:
  Fly   260 FISQRDSYYGLGLW---------KYFPT----KTYRDFARAEDLIYDVISEIIDHELEELKKSAA 311

  Fly   263 QPE-----ITSVINKAIELHRNGEMSREEVQSECCSFVVAAFETTGDTVYHALI----------- 311
            ..:     :.|:....:||.   ::...:.:|....|:.|..||..:|:...|.           
  Fly   312 CEDDEAAGLRSIFLNILELK---DLDIRDKKSAIIDFIAAGIETLANTLLFVLSSVTGDPGAMPR 373

  Fly   312 LLAMFPEHQDTVYQELKELFPVAGDFEVTYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFR 376
            :|:.|.|::||               .:..|.|....:.:..:.|:.||.|:.....|....|..
  Fly   374 ILSEFCEYRDT---------------NILQDALTNATYTKACIQESYRLRPTAFCLARILEEDME 423

  Fly   377 LS-----SGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPDHFLP----------DNVRDRHPY 426
            ||     :|.|:     :..::.|.|::.:..|.  ..|.|:.::.          ||..     
  Fly   424 LSGYSLNAGTVV-----LCQNMIACHKDSNFQGA--KQFTPERWIDPATENFTVNVDNAS----- 476

  Fly   427 AYIPFSKGRRNCIGWKYGLMSSKLALSKILRNCKVS------TSFRY 467
            ..:||..|||:|.|.::..|...|.|:|::....||      |.|.:
  Fly   477 IVVPFGVGRRSCPGKRFVEMEVVLLLAKMVLAFDVSFVKPLETEFEF 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a3NP_650170.2 p450 33..463 CDD:299894 100/503 (20%)
shdNP_001261843.1 p450 63..528 CDD:299894 102/509 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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