DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a3 and Cyp4x1

DIOPT Version :10

Sequence 1:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_663708.1 Gene:Cyp4x1 / 246767 RGDID:628719 Length:507 Species:Rattus norvegicus


Alignment Length:529 Identity:131/529 - (24%)
Similarity:217/529 - (41%) Gaps:99/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLAVGVCFWIYF-----LWSRRRLYMMHFK-IPGPMGLPILGIAFEYLITYKRKMSIRTKYMDI 64
            |.||:..|..:..     |:.||:..:...: .|||....:||   ......:..|....:.:..
  Rat    14 LHLALVFCLALVLMQAVKLYLRRQRLLRDLRPFPGPTAHWLLG---HQKFLQEDNMEKLDEIVKE 75

  Fly    65 YGSTCLVWVGP-TPFVITRDPKIAEEIFLS---PECLNRSSIFSKPVNSCTGDGLLSLEASKWVD 125
            |......|||| ..|....||..| :||||   |    ::....:.:....|.|||:|:..:|..
  Rat    76 YPCAFPCWVGPFQAFFYIYDPDYA-KIFLSRTDP----KTQYLHQLMTPFLGRGLLNLDGPRWFQ 135

  Fly   126 RRKNLNPAFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEKKVRDDIVRWSFRIATQTT------ 184
            .|..|.|||.|::|   .|..:..|.::...||               :|.....||.|      
  Rat   136 HRCLLTPAFHQDIL---KPCVDMMAHSVNMMLD---------------KWEKTWTTQETTIEVFE 182

  Fly   185 ----VGTDVKKDASF---KNDSVLKSYETFMKI------IVMNVLLPFTHNK--IFSTLGGFETQ 234
                :..|:....:|   .|..:..:||:::|.      |:.:.|..|.|:.  ||         
  Rat   183 HINLMTLDIIMKCAFGQETNCQINGTYESYVKATFELGEIISSRLYNFWHHHDIIF--------- 238

  Fly   235 KALAKSNVNKMIGTIV---------DKKLMTKPESGSQPEITS--VINKAIELHRNGE--MSREE 286
            |...|.:..:.:|.::         |:|...|.:.......||  .::..:......|  .|..:
  Rat   239 KLSPKGHCFQELGKVIHQCTEKIIQDRKKTLKDQVNQDDTQTSQNFLDIVLSAQAGDEKAFSDAD 303

  Fly   287 VQSECCSFVVAAFETTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGD-FEVTYDDLQRMVFL 350
            ::||..:|:.|..:.:..::...|..||:.|||||....|::.   :.|| ..:|::.|..:.:.
  Rat   304 LRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRS---ILGDGSSITWEQLDEIPYT 365

  Fly   351 ERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPDHF 415
            ...:.|||||||.:|...||..:...|..|..:|.|:.:.:.|:..|.|...| .||..|:|..|
  Rat   366 TMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVW-KDPKVFDPLRF 429

  Fly   416 LPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRNCKVSTSFRYEDLEFVDNIGMEL 480
            ..:|...|||.|::|||.|.|||||.::.::..|:|::..|...:|:.               :|
  Rat   430 TKENSEQRHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAA---------------DL 479

  Fly   481 AQSPGLEFH 489
            .:.|....|
  Rat   480 TRPPAFSSH 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a3NP_650170.2 CYP313-like 66..487 CDD:410680 116/459 (25%)
Cyp4x1NP_663708.1 CYP4B-like 66..500 CDD:410771 119/474 (25%)

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