DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a3 and Cyp26a1

DIOPT Version :10

Sequence 1:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:466 Identity:113/466 - (24%)
Similarity:209/466 - (44%) Gaps:33/466 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLAVGVCFW-IYFLWSRRRLYMMHFKIPGPMGLPILGIAFEYLITYKRKMSI-RTKYMDIYGST 68
            ||....:..| :|.:.||.|...:... ||.||.|..|...:.::..::.:.: |.||..||.:.
Mouse    19 LLFLAALKLWDLYCVSSRDRSCALPLP-PGTMGFPFFGETLQMVLQRRKFLQMKRRKYGFIYKTH 82

  Fly    69 CLVWVGPTPFVITRDPKIAEEIFLSPECLNRSSIFSKPVNSCTGDGLLS-LEASKWVDRRKNLNP 132
              ::..||..|:..|.  ...|.|....| .|..:...|.:..|.|.|| |..|....|:|.:..
Mouse    83 --LFGRPTVRVMGADN--VRRILLGEHRL-VSVHWPASVRTILGAGCLSNLHDSSHKQRKKVIMQ 142

  Fly   133 AFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEK--KVRDDIVRWSFRIATQTTVGTDVKKDASF 195
            ||.:..|..::|:...|..:.   |:..:..||:  .|..::.|..||||.:..:|.:.......
Mouse   143 AFSREALQCYVPVIAEEVSSC---LEQWLSCGERGLLVYPEVKRLMFRIAMRILLGCEPGPAGGG 204

  Fly   196 KND-SVLKSYETFMK-IIVMNVLLPFTHNKIFSTLGGFETQKA--LAKSNVNKMIGTIVDKKLMT 256
            ::: .:::::|...: :..:.:.:||:        |.:...||  |..:.:.:.|...:.:...|
Mouse   205 EDEQQLVEAFEEMTRNLFSLPIDVPFS--------GLYRGVKARNLIHARIEENIRAKIRRLQAT 261

  Fly   257 KPESGSQPEITSVINKAIELHRNGEMSREEVQSECCSFVVAAFETTGDTVYHALILLAMFPEHQD 321
            :|:.|.:..:..:|..:.|  |...:..:.::......:....|||.......:..|.::|....
Mouse   262 EPDGGCKDALQLLIEHSWE--RGERLDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHVLQ 324

  Fly   322 TVYQELKE---LFPVAGDFEVTYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVI 383
            .|.:|:|.   |.....|.::..:.|:::.:...|:.|||||.|.||...|..::.|.| :|..|
Mouse   325 KVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIKETLRLNPPVPGGFRVALKTFEL-NGYQI 388

  Fly   384 PKGVGIGIDIFATHRNRDHWGTDPSSFNPDHFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSS 448
            |||..:...|..||...|.: |:...||||.|:..:..|...:::|||..|.|:|:|.::..:..
Mouse   389 PKGWNVIYSICDTHDVADIF-TNKEEFNPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKILL 452

  Fly   449 KLALSKILRNC 459
            |:...::.|:|
Mouse   453 KIFTVELARHC 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a3NP_650170.2 CYP313-like 66..487 CDD:410680 95/404 (24%)
Cyp26a1NP_031837.2 CYP26A1 55..490 CDD:410731 101/429 (24%)

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