DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a2 and Cyp4f1

DIOPT Version :10

Sequence 1:NP_650169.3 Gene:Cyp313a2 / 41487 FlyBaseID:FBgn0038006 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:496 Identity:127/496 - (25%)
Similarity:214/496 - (43%) Gaps:67/496 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLIAASLILWIRFLWSRRKLYMLMMQLPGRMGLP----LLGNSVRYLIISRGRMSSRTTYMDKHG 66
            ||..||.|| .:.|......|....:|.|....|    |:|: |..:..:...:...|..:..:.
  Rat    23 LLFGASWIL-AQILTQIYAAYRNFRRLRGFPQPPKRNWLMGH-VGMVTPTEQGLKELTRLVGTYP 85

  Fly    67 STYMAWIG-TTPIVITRDPKIAEKVLTSPFCINRSSQTTNALALS-----------MGYGLLTLQ 119
            ..::.||| ..|::......|...:|      |.|:    |:||.           :|.|||...
  Rat    86 QGFLMWIGPMVPVITLCHSDIVRSIL------NASA----AVALKDVIFYTILKPWLGDGLLVSA 140

  Fly   120 GSKWMARRKHMNPAFKHSVLLSFLPIFNAETDLLVSVFDSFVGQGEKDVLSDLIRWSFAIATQTT 184
            |.||...|:.:.|||..::|..::.|||..|:::.:.:...:.:|...:  |:.. ..::.|..:
  Rat   141 GDKWSRHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWKRLISEGSSRL--DMFE-HVSLMTLDS 202

  Fly   185 LGTDV-TKDDNFENDA-------------ILKTYQSMLRLTIINIFVPFVQNKIVSKLFGLEWLR 235
            |...| :.|.|.:..:             :.|.:|..|      :|:..:.|....   |:.:  
  Rat   203 LQKCVFSFDSNCQEKSSEYIAAILELSALVAKRHQQPL------LFMDLLYNLTPD---GMRF-- 256

  Fly   236 RRDASAINKMINNILDKKLNSNPENYCESEL------KTVIHRAIELFRND----EMSLMELGAE 290
            .:..:.:::..:.::.::..:.|:...:..|      ||:....:.|...|    |:|..::.||
  Rat   257 HKACNLVHEFTDAVIRERRRTLPDQGLDEFLKSKAKSKTLDFIDVLLLTKDEDGKELSDEDIRAE 321

  Fly   291 CSSMVLAAFETSAHTVYYALVLLAMFPEHQEMVFNEIKEHFPLAKGIEVTHTDLQQLVYLDRVLN 355
            ..:.:....:|:|..:.:.|..||..||:||....|::|........|:...||.||.:|...:.
  Rat   322 ADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIK 386

  Fly   356 ETLRLMPSVPFSSRETLEDLRLSNGVVIPKGMTISIDIFNTQRNTDYWGSEAAQFNPENFLPEKI 420
            |:|||.|.|...||...:|:.|.:|..||||:...|.||....|...| .:...:||..|.||.|
  Rat   387 ESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVW-PDPEVYNPFRFDPENI 450

  Fly   421 HDRHPYAFIPFSKGKRNCIGWRYGLMSSKLALVKILRNYKL 461
            .|..|.||||||.|.|||||..:.:...|:||...|..::|
  Rat   451 KDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a2NP_650169.3 CYP313-like 66..487 CDD:410680 112/432 (26%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 113/443 (26%)

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