DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a2 and cyp26a1

DIOPT Version :9

Sequence 1:NP_650169.3 Gene:Cyp313a2 / 41487 FlyBaseID:FBgn0038006 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571221.2 Gene:cyp26a1 / 30381 ZFINID:ZDB-GENE-990415-44 Length:492 Species:Danio rerio


Alignment Length:506 Identity:130/506 - (25%)
Similarity:222/506 - (43%) Gaps:83/506 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLIAASLILWIRFLWSRRKLYMLMMQL----------PGRMGLPLLGNSVRYLIISRG---RMSS 57
            ||..|::.||          .|||::.          ||.||||.:|.::: ||:.|.   ||..
Zfish    19 LLFLAAVKLW----------EMLMIRRVDPNCRSPLPPGTMGLPFIGETLQ-LILQRRKFLRMKR 72

  Fly    58 RTTYMDKHGSTYMAWIGTTPIVITRDPKIAEKVLTSPFCINRSSQTTNALALSMGYGLLT-LQGS 121
            :     |:|..|...:...|.|.........::|.....: .|.|...::...:|...|: :.|.
Zfish    73 Q-----KYGCIYKTHLFGNPTVRVMGADNVRQILLGEHKL-VSVQWPASVRTILGSDTLSNVHGV 131

  Fly   122 KWMARRKHMNPAFKHSVLLSFLPIFNAETDLLVSVFDSFVGQGEKD----VLSDLIRWSFAIATQ 182
            :...::|.:..||....|..::|:...|   :.|....::   :||    |..::.:..|.||.:
Zfish   132 QHKNKKKAIMRAFSRDALEHYIPVIQQE---VKSAIQEWL---QKDSCVLVYPEMKKLMFRIAMR 190

  Fly   183 TTLG--TDVTKDDNFENDAILKTYQSMLR-LTIINIFVPFVQNKIVSKLF-GLEWLRRRDASAIN 243
            ..||  .:..|.|..|   :::.::.|:: |..:.|.|||      |.|: ||     |..:.|:
Zfish   191 ILLGFEPEQIKTDEQE---LVEAFEEMIKNLFSLPIDVPF------SGLYRGL-----RARNFIH 241

  Fly   244 KMINNILDKKLNSNPENYCESELKTVIHRAIE-LFRNDE-MSLMELGAECSSMVLAAFETSAHTV 306
            ..|...:.||:..: :|..|.:.|..:...|| ..|:|| .||..:....:.::....||:|.|.
Zfish   242 SKIEENIRKKIQDD-DNENEQKYKDALQLLIENSRRSDEPFSLQAMKEAATELLFGGHETTASTA 305

  Fly   307 YYALVLLAMFPEHQEMVFNEIKEHFPL-----AKGIEVTHTDLQQLVYLDRVLNETLRLMPSVPF 366
            ...::.|.:..|..:.|..|::|...:     .||:.:...|  ||.|...|:.||||:.|.||.
Zfish   306 TSLVMFLGLNTEVVQKVREEVQEKVEMGMYTPGKGLSMELLD--QLKYTGCVIKETLRINPPVPG 368

  Fly   367 SSRETLEDLRLSNGVVIPKGMTISIDIFNTQRNTDYWGSEAAQFNPENFLPEKIHDRHPYAFIPF 431
            ..|..|:...| ||..||||..:...|.:|....|.:.:: .:|.||.|:.:.:.|...:.:|||
Zfish   369 GFRVALKTFEL-NGYQIPKGWNVIYSICDTHDVADVFPNK-DEFQPERFMSKGLEDGSRFNYIPF 431

  Fly   432 SKGKRNCIGWRYGLMSSKLALVKILR--NYKLK----------TSFPYENL 470
            ..|.|.|:|..:..:..|:.||::.:  |:.|.          |.:|.:||
Zfish   432 GGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGPPTMKTGPTVYPVDNL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a2NP_650169.3 p450 33..463 CDD:299894 118/460 (26%)
cyp26a1NP_571221.2 p450 14..487 CDD:299894 130/506 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.