DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a2 and Cyp4f39

DIOPT Version :9

Sequence 1:NP_650169.3 Gene:Cyp313a2 / 41487 FlyBaseID:FBgn0038006 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_006241152.1 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:543 Identity:128/543 - (23%)
Similarity:231/543 - (42%) Gaps:110/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QLLIAASLILWIRFLWSRRKLYMLMMQL--------------------PGRMGLPLLGNSVRYLI 49
            ::.:.::|:|::.||     |:.|::|.                    |||..  |||:...||.
  Rat    20 RVYVLSALLLFLLFL-----LFRLLLQAFKLFSDFRITCRRLSCFPEPPGRHW--LLGHMSMYLP 77

  Fly    50 ISRGRMSSRTTYMDKHGSTYMAWIGT-TPIVITRDPKIAEKVLTSPFCINRSSQ-TTNALALSMG 112
            ..:| :.:....:|......:||:|. .|:::...|...:.||.:...|....: ..:.|...:|
  Rat    78 NEKG-LQNEKKVLDTMHHIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLG 141

  Fly   113 YGLLTLQGSKWMARRKHMNPAFKHSVLLSFLPIFNAETDLLVSVFDSFVGQGEKDVLSDLIRWSF 177
            .|||..:|:||...|:.:.|||...:|..::.|||...:::.:.:...:.:|             
  Rat   142 DGLLISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEG------------- 193

  Fly   178 AIATQTTLGTDVTKDDNFENDAILKTYQSMLRLTIINIFVPFVQNKI---VSKLFGLEWL----- 234
                      .||..|.||:.::: |..|:.:  .:..:....|.|:   :|.:..|..|     
  Rat   194 ----------SVTSFDMFEHVSLM-TLDSLQK--CVFSYSSDCQEKLSDYISSIIELSALVVRRQ 245

  Fly   235 ------------------RRRDA-SAINKMINNILDKKLNSNPENYCESELKTVIHRAIE----- 275
                              |.|.| ..::.....::.::..:..|...|:.||....:.::     
  Rat   246 YRLHHYLDFIYYLTADGRRFRQACDTVHNFTTEVIQQRRRALRELGAEAWLKAKQGKTLDFIDVL 310

  Fly   276 LFRND----EMSLMELGAECSSMVLAAFETSAHTVYYALVLLAMFPEHQEMVFNEIKEHFPLAKG 336
            |...|    |:|..::.||..:.:....:|::..:.:||..||.:||:|:....||:|   :.||
  Rat   311 LLAKDEEGKELSDEDIRAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQE---VMKG 372

  Fly   337 IEVTH---TDLQQLVYLDRVLNETLRLMPSVPFSSRETLEDLRLSNGVVIPKGMTISIDIFNTQR 398
            .|:..   .||.||.:....:.|:||..|.|...||...||::|.:|.:||||:...:.|:.|..
  Rat   373 RELEELDWDDLTQLPFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHY 437

  Fly   399 NTDYWGSEAAQFNPENFLPEKIHDRHPYAFIPFSKGKRNCIGWRYGLMSSKLALVKILRNYKLKT 463
            |...| .::..:||..|.|:....|.|.||:|||.|.|||||..:.:...::.:...|..::|. 
  Rat   438 NPLVW-PDSKVYNPYRFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLS- 500

  Fly   464 SFPYENLEFVDHMVIKLAQSPQL 486
                     ||. ..|:.:.|:|
  Rat   501 ---------VDR-TRKVRRKPEL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a2NP_650169.3 p450 33..463 CDD:299894 116/470 (25%)
Cyp4f39XP_006241152.1 CYP4F 82..523 CDD:410772 112/473 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.