DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a2 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_650169.3 Gene:Cyp313a2 / 41487 FlyBaseID:FBgn0038006 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:543 Identity:128/543 - (23%)
Similarity:231/543 - (42%) Gaps:110/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QLLIAASLILWIRFLWSRRKLYMLMMQL--------------------PGRMGLPLLGNSVRYLI 49
            ::.:.::|:|::.||     |:.|::|.                    |||..  |||:...||.
  Rat    20 RVYVLSALLLFLLFL-----LFRLLLQAFKLFSDFRITCRRLSCFPEPPGRHW--LLGHMSMYLP 77

  Fly    50 ISRGRMSSRTTYMDKHGSTYMAWIGT-TPIVITRDPKIAEKVLTSPFCINRSSQ-TTNALALSMG 112
            ..:| :.:....:|......:||:|. .|:::...|...:.||.:...|....: ..:.|...:|
  Rat    78 NEKG-LQNEKKVLDTMHHIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLG 141

  Fly   113 YGLLTLQGSKWMARRKHMNPAFKHSVLLSFLPIFNAETDLLVSVFDSFVGQGEKDVLSDLIRWSF 177
            .|||..:|:||...|:.:.|||...:|..::.|||...:::.:.:...:.:|             
  Rat   142 DGLLISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEG------------- 193

  Fly   178 AIATQTTLGTDVTKDDNFENDAILKTYQSMLRLTIINIFVPFVQNKI---VSKLFGLEWL----- 234
                      .||..|.||:.::: |..|:.:  .:..:....|.|:   :|.:..|..|     
  Rat   194 ----------SVTSFDMFEHVSLM-TLDSLQK--CVFSYSSDCQEKLSDYISSIIELSALVVRRQ 245

  Fly   235 ------------------RRRDA-SAINKMINNILDKKLNSNPENYCESELKTVIHRAIE----- 275
                              |.|.| ..::.....::.::..:..|...|:.||....:.::     
  Rat   246 YRLHHYLDFIYYLTADGRRFRQACDTVHNFTTEVIQQRRRALRELGAEAWLKAKQGKTLDFIDVL 310

  Fly   276 LFRND----EMSLMELGAECSSMVLAAFETSAHTVYYALVLLAMFPEHQEMVFNEIKEHFPLAKG 336
            |...|    |:|..::.||..:.:....:|::..:.:||..||.:||:|:....||:|   :.||
  Rat   311 LLAKDEEGKELSDEDIRAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQE---VMKG 372

  Fly   337 IEVTH---TDLQQLVYLDRVLNETLRLMPSVPFSSRETLEDLRLSNGVVIPKGMTISIDIFNTQR 398
            .|:..   .||.||.:....:.|:||..|.|...||...||::|.:|.:||||:...:.|:.|..
  Rat   373 RELEELDWDDLTQLPFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHY 437

  Fly   399 NTDYWGSEAAQFNPENFLPEKIHDRHPYAFIPFSKGKRNCIGWRYGLMSSKLALVKILRNYKLKT 463
            |...| .::..:||..|.|:....|.|.||:|||.|.|||||..:.:...::.:...|..::|. 
  Rat   438 NPLVW-PDSKVYNPYRFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLS- 500

  Fly   464 SFPYENLEFVDHMVIKLAQSPQL 486
                     ||. ..|:.:.|:|
  Rat   501 ---------VDR-TRKVRRKPEL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a2NP_650169.3 CYP313-like 66..487 CDD:410680 111/462 (24%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 112/473 (24%)

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