DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a2 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_650169.3 Gene:Cyp313a2 / 41487 FlyBaseID:FBgn0038006 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001129072.1 Gene:Cyp4v3 / 266761 RGDID:708530 Length:525 Species:Rattus norvegicus


Alignment Length:545 Identity:137/545 - (25%)
Similarity:235/545 - (43%) Gaps:92/545 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIAASLILW-----------------IRFLWSRRKLYMLMMQLPG-RMGLPLLGNSVRYLIISRG 53
            |....|:||                 ::.|.|..:.:..|..:|. ....||:|:::        
  Rat     8 LSGQKLLLWGAASAVSVAGATVLLNILQMLVSYARKWQQMRPIPSVARAYPLVGHAL-------- 64

  Fly    54 RMSSRTT--------YMD--KHGSTYMAWIGTTPIVITRDPKIAEKVLTSPFCINRSSQTTNALA 108
            .|....|        |.:  :|......|||..|:|.....:..|.:|||...|::|.. ...|.
  Rat    65 FMKPNNTEFFQQIIQYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDKSFM-YKFLQ 128

  Fly   109 LSMGYGLLTLQGSKWMARRKHMNPAFKHSVLLSFLPIFNAETDLLVSVFDSFVGQGEKDVLSDLI 173
            ..:|.||||..||||.||||.:.|:|..::|..||.:.|.:.::||:..:..|.|...:....:.
  Rat   129 PWLGLGLLTSTGSKWRARRKMLTPSFHFTILEDFLDVMNEQANILVNKLEKHVNQEAFNCFFPIT 193

  Fly   174 RWSFAIATQTTLGTDVTKDDNFENDAILKTYQSMLRLTIINIFVPFVQNKIVSKLFGLEWL---- 234
            ..:..|..:|.:|.::....|.:::.:...|:               .:.::.:...:.|.    
  Rat   194 LCALDIICETAMGKNIGAQSNGDSEYVRTVYR---------------MSDMIYRRMKMPWFWFDL 243

  Fly   235 ----------RRRDASAINKMINNILDKKLNS-NPENYC--------ESELKTVIHRAIELFRND 280
                      .::...:::...||::.:::|: ..|..|        .|:.|......:.|...|
  Rat   244 WYLMFKEGRDHKKGLKSLHTFTNNVIAERVNARKAEQDCIGAGRGPLPSKTKRKAFLDLLLSVTD 308

  Fly   281 E----MSLMELGAECSSMVLAAFETSAHTVYYALVLLAMFPEHQEMVFNEI-----KEHFPLAKG 336
            |    :|..::..|..:.:....:|:|..:.::|.||...||.|..|..|:     :.|.|    
  Rat   309 EEGNKLSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRP---- 369

  Fly   337 IEVTHTDLQQLVYLDRVLNETLRLMPSVPFSSRETLEDLRLSNGVVIPKGMTISIDIFNTQRNTD 401
              ||..||::|.|||.|:.||||:.||||..:|...||..:: |..|.||....|..:...|:..
  Rat   370 --VTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVA-GYKISKGTEAVIIPYALHRDPR 431

  Fly   402 YWGSEAAQFNPENFLPEKIHDRHPYAFIPFSKGKRNCIGWRYGLMSSKLALVKILRNYKLKTSFP 466
            |: .:..:|.||.|.||....|||||::|||.|.|||||.::.:|..|..|..|||.:.::::..
  Rat   432 YF-PDPEEFQPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIESNQK 495

  Fly   467 YENLEFVDHMVIKLAQSPQLAFERR 491
            .|.|.....::::......:..:||
  Rat   496 REELGLAGDLILRPNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a2NP_650169.3 p450 33..463 CDD:299894 126/472 (27%)
Cyp4v3NP_001129072.1 CYP4V 76..515 CDD:410773 122/462 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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