DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a5 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_650168.1 Gene:Cyp313a5 / 41486 FlyBaseID:FBgn0038005 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_569092.2 Gene:Cyp26a1 / 154985 RGDID:620161 Length:497 Species:Rattus norvegicus


Alignment Length:479 Identity:115/479 - (24%)
Similarity:222/479 - (46%) Gaps:59/479 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLTLQIFEAFAIILCVYFLWSRRRFYIMMLKLPGPMGFPFIGLAFEYIRLKRKI-----RLRTIL 60
            :|.|.:|.|...:..:|.:.||.|...:.|. ||.|||||.|...:.:..:||.     |....:
  Rat    15 VLPLLLFLAALKLWDLYCVSSRDRSCALPLP-PGTMGFPFFGETLQMVLQRRKFLQMKRRKYGFI 78

  Fly    61 FK--IYGKTVLTWIGLTPV--LVTCEPKILEDIFTSPNCSNRSSVVDKAISSCLGLGLLT-LKNN 120
            :|  ::|:..:..:|...|  ::..|.:::...:.:            ::.:.||.|.|: |.::
  Rat    79 YKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPA------------SVRTILGAGCLSNLHDS 131

  Fly   121 HWNERRKLLLPSFKNNAVLSFVPVLNNEANFLVTLLAEFVDGGDINLL--PELNKWSFKIAAQIT 183
            ...:|:|:::.:|...|:..:|||:..|.:   ..|.:::..|:..||  ||:.:..|:||.:|.
  Rat   132 SHKQRKKVIMQAFNREALQCYVPVIAEEVS---GCLEQWLSCGERGLLVYPEVKRLMFRIAMRIL 193

  Fly   184 MGDEVRNQANYQN-GNLLESYKAL-NNLIPIGVVMPWLRNKYLGKLFSYEKRRLEAATQSNAFIK 246
            :|.|.......:: ..|:|:::.: .||..:.:.:|          ||...|.::|....:|.|:
  Rat   194 LGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVP----------FSGLYRGVKARNLIHARIE 248

  Fly   247 DIIDKKL-----SSTDNSSEPALIDRILNLVRIGE-LSYDDVMGEFSNIIFAASDTLSITVNNVL 305
            :.|..|:     :..|...:.||...|.:....|| |....:....:.::|...:|.:....:::
  Rat   249 ENIRAKIRRLQAAEPDAGCKDALQLLIEHSWERGERLDMQALKQSSTELLFGGHETTASAATSLI 313

  Fly   306 ILMAMFPKYQDNVFEELAEVFPSGGEFEASHAD-------LEKLVKLDRVLHETMRLIPAVPLLI 363
            ..:.::|    :|.:::.|...|.|....||.:       ||:|..:..|:.||:||.|.||...
  Rat   314 TYLGLYP----HVLQKVREEIKSKGLLCKSHHEDKLDMETLEQLKYIGCVIKETLRLNPPVPGGF 374

  Fly   364 RQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPENKRARPPYSYLPFSK 428
            |....:.:| ||:.||:|..::..|..||...|.: .....||||.|...:......:|::||..
  Rat   375 RVALKTFEL-NGYQIPKGWNVIYSICDTHDVADSF-TNKEEFNPDRFTSLHPEDTSRFSFIPFGG 437

  Fly   429 GKKTCLGWKLSLISAKLALAKILR 452
            |.::|:|.:.:.|..|:...::.|
  Rat   438 GLRSCVGKEFAKILLKIFTVELAR 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a5NP_650168.1 p450 33..458 CDD:299894 106/447 (24%)
Cyp26a1NP_569092.2 p450 43..491 CDD:299894 107/451 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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