DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and Prss2l1

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_003749780.1 Gene:Prss2l1 / 683849 RGDID:1597830 Length:246 Species:Rattus norvegicus


Alignment Length:264 Identity:81/264 - (30%)
Similarity:133/264 - (50%) Gaps:35/264 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MLLILRQGLADVVTSTTESPTRINGGQRVNE-TVPFQVSLQMQRRGRWQHFCGGSIVSGQHVLTA 72
            :|::...|.|  |....:...:|.||....| :||:||||     ....||||||:::.|.|::|
  Rat     4 LLILALVGTA--VAFPVDDDDKIVGGYTCQENSVPYQVSL-----NSGYHFCGGSLINDQWVVSA 61

  Fly    73 AHCMEKMKVEDVSVVVG--TLNWKAGGLRHRLVTKHV-HPQYSMNPRIINDIALVKVTPPFRLER 134
            |||.:..    :.|.:|  .:|...|..:.....|.: ||.:. ...:.|||.|:|::.|.:| .
  Rat    62 AHCYKSR----IQVRLGEHNINVLEGNEQFVNAAKIIKHPNFD-RKTLNNDIMLIKLSSPVKL-N 120

  Fly   135 SDISTILIGGSDRIGEKVPV----RLTGWGSTSPSTSSATLPDQLQALNYRTISNEDC--NQKGF 193
            :.::|:.:..|     ..|.    .::|||:|  .:.....||.||.|:...:...||  :..| 
  Rat   121 ARVATVALPSS-----CAPAGTQCLISGWGNT--LSFGVNEPDLLQCLDAPLLPQADCEASYPG- 177

  Fly   194 RVTRNEICALAVQ-GQGACVGDSGGPLIRPGKQPHLVGIVSYGSSTCAQGRPDVYTRVSSFLPYI 257
            ::|.|.:||..:: |:.:|.||||||::..|:   |.||||:|........|.|||:|.:::.:|
  Rat   178 KITDNMVCAGFLEGGKDSCQGDSGGPVVCNGE---LQGIVSWGYGCALPDNPGVYTKVCNYVDWI 239

  Fly   258 SQVI 261
            ...|
  Rat   240 EDTI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 75/237 (32%)
Prss2l1XP_003749780.1 Tryp_SPc 24..242 CDD:238113 76/239 (32%)

Return to query results.
Submit another query.