DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and ovch1

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_073801826.1 Gene:ovch1 / 393114 ZFINID:ZDB-GENE-040426-834 Length:582 Species:Danio rerio


Alignment Length:295 Identity:84/295 - (28%)
Similarity:135/295 - (45%) Gaps:45/295 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LFCMLLILRQGLADVVTSTTES------------------------PTRINGGQRV-NETVPFQV 45
            ||.::|.|:...||...|:.|:                        .:||.||:.. ..:.|:||
Zfish     8 LFILILTLKWTKADSDASSFETDCILDKGCDVLAGIRSFVPEDEVEESRIIGGKEAWAHSWPWQV 72

  Fly    46 SLQMQRRGRWQHFCGGSIVSGQHVLTAAHCMEKMKVEDV-SVVVGTLNWKAG--GLRHRLVTKHV 107
            |||...    ...|||:|:....|:||.||.::.|...: :.|||..|....  ..|..:..:.:
Zfish    73 SLQYND----VPTCGGAILDQLWVITAGHCFKRYKKPSMWNAVVGLHNLDNANESSRESIQVQKI 133

  Fly   108 --HPQYSMNPRIINDIALVKVTPPFRLERSDISTILIGGSDRIGEKVPVRLTGWGSTSPSTSSAT 170
              |..|:.... .|||||:|:..|....:. :..|.:..:| :...|...:|||||.:.:...|:
Zfish   134 FSHKNYNQKTN-ENDIALLKLQSPLVFSKF-VRPIGVFNND-LPPLVTCTVTGWGSVTENGPQAS 195

  Fly   171 LPDQLQALNYRTISNEDCNQ--KGFRVTRNEICALAVQ-GQGACVGDSGGPL-IRPGKQPHLVGI 231
               :||.:|......:.||:  :| :|.::.|||.|.: |..||.||||||| ...|::..|.|:
Zfish   196 ---RLQEVNVTVYEPQKCNRFYRG-KVLKSMICAGANEGGMDACQGDSGGPLSCFDGERYKLAGV 256

  Fly   232 VSYGSSTCAQGRPDVYTRVSSFLPYISQVINQDLA 266
            ||:|.......:|.|||.:..:..::...:..:||
Zfish   257 VSWGVGCGRAQKPGVYTTLYHYRQWMVSSMRGELA 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 74/236 (31%)
ovch1XP_073801826.1 None

Return to query results.
Submit another query.