DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and tpr

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster


Alignment Length:270 Identity:74/270 - (27%)
Similarity:119/270 - (44%) Gaps:47/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ADVVTSTTESPTRINGGQRVNETVPFQVSLQMQRRGRWQHFCGGSIVSGQHVLTAAHCMEKMKVE 82
            :|.|........||.|||. .|...:.....:...||:  :|..|:::.|.:|||:||:...:.|
  Fly   114 SDCVCGIANIQKRIVGGQE-TEVHQYPWVAMLLYGGRF--YCAASLLNDQFLLTASHCVYGFRKE 175

  Fly    83 DVSVVVGTLNWKAGGLRHRLVTKHV------------HPQYSMNPRIINDIALVKVTPPFRLERS 135
            .:||.:         |.|.....|:            ||:|:.. ...||||::|:..|.     
  Fly   176 RISVRL---------LEHDRKMSHMQKIDRKVAEVITHPKYNAR-NYDNDIAIIKLDEPV----- 225

  Fly   136 DISTIL------IGGSDRIGEKVPVRLTGWGSTSPSTSSATLPDQLQALNYRTISNEDCNQK--G 192
            :.:.:|      ..|....||...|  ||||:......::   |.||.:....:|.::|.:.  |
  Fly   226 EFNEVLHPVCMPTPGRSFKGENGIV--TGWGALKVGGPTS---DTLQEVQVPILSQDECRKSRYG 285

  Fly   193 FRVTRNEIC-ALAVQGQGACVGDSGGPL--IRPGKQPH-LVGIVSYGSSTCAQGRPDVYTRVSSF 253
            .::|.|.:| .....|:.:|.|||||||  :..|.:.| :.|:||:|......|.|.||.||:.:
  Fly   286 NKITDNMLCGGYDEGGKDSCQGDSGGPLHIVASGTREHQIAGVVSWGEGCAKAGYPGVYARVNRY 350

  Fly   254 LPYISQVINQ 263
            ..:|..:..|
  Fly   351 GTWIKNLTKQ 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 70/250 (28%)
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 70/251 (28%)

Return to query results.
Submit another query.