DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and Corin

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:298 Identity:77/298 - (25%)
Similarity:118/298 - (39%) Gaps:83/298 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LADVVTSTTE---------SPT-RINGGQRVNETVPFQVSLQMQRRGRWQ------------HFC 59
            :||:..|..|         .|: ||.||.:.:.             |.|.            .:|
  Fly  1080 MADLTCSNYECGRVKRGRHKPSRRIIGGTQASP-------------GNWPFLAAILGGPEKIFYC 1131

  Fly    60 GGSIVSGQHVLTAAHCMEKMKV---EDVSVVVGTL---NWKAGGLRHRLVTKHVHPQYSMNPRII 118
            .|.::|.|.||||:||:....|   ||.::.:|..   ::...|.:.::.....||||:|.....
  Fly  1132 AGVLISDQWVLTASHCVGNYSVIDLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHD 1196

  Fly   119 NDIAL---------------VKVTPPF--RLERSDISTILIGGSDRIGEKVPVRLTGWGSTSPST 166
            |||||               |.:.||.  .|....:.|::                |||......
  Fly  1197 NDIALFQLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVI----------------GWGKREDKD 1245

  Fly   167 SSATLPDQLQALNYRTISNEDCNQ--KGFRVTRNEICA-LAVQGQGACVGDSGGPLI--RPGKQP 226
            ..:|....:..:....|:...|::  ....|:...:|| ....|:.||.|||||||:  .||::.
  Fly  1246 PKSTYEYIVNEVQVPIITRNQCDEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKN 1310

  Fly   227 H--LVGIVSYGSSTCAQGR-PDVYTRVSSFLPYISQVI 261
            .  :.||||:| ..||..| |.||..|..::|:|.:.|
  Fly  1311 RWFVGGIVSWG-IMCAHPRLPGVYANVVQYVPWIQEQI 1347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 70/269 (26%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 70/271 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.