DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and 1810009J06Rikl

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:1810009J06Rikl / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:252 Identity:81/252 - (32%)
Similarity:127/252 - (50%) Gaps:24/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LADVVTSTTESPTRINGGQRV-NETVPFQVSLQMQRRGRWQHFCGGSIVSGQHVLTAAHCMEKMK 80
            |...|........:|.||... ...||:||||    .....|.||||::|.|.||:||||.::  
  Rat    10 LGAAVALPVNDDDKIVGGYTCPKHLVPYQVSL----HDGISHQCGGSLISDQWVLSAAHCYKR-- 68

  Fly    81 VEDVSVVVGTLNWKA--GGLRHRLVTKHV-HPQYSMNPRIINDIALVKVTPPFRLERSDISTILI 142
              .:.|.:|..|...  ||.:.....|.: ||:|:.: .:.|||.|:|:..|..| .|.:||:.:
  Rat    69 --KLQVRLGEHNIHVLEGGEQFIDAEKIIRHPEYNKD-TLDNDIMLIKLKSPAVL-NSQVSTVSL 129

  Fly   143 GGSDRIGEKVPVRLTGWGSTSPSTSSATLPDQLQALNYRTISNEDCNQKGF--RVTRNEICALAV 205
            ..| .........::|||:|  .:.....|..||.|....:|...| :|.:  ::|.|..|...:
  Rat   130 PRS-CASTDAQCLVSGWGNT--VSIGGKYPALLQCLEAPVLSASSC-KKSYPGQITSNMFCLGFL 190

  Fly   206 Q-GQGACVGDSGGPLIRPGKQPHLVGIVSYGSSTCAQGRPDVYTRVSSFLPYISQVI 261
            : |:.:|.||||||::..|:   :.||||:||....:|:|.|||:|.::|.:|.:.:
  Rat   191 EGGKDSCDGDSGGPVVCNGE---IQGIVSWGSVCAMRGKPGVYTKVCNYLSWIQETM 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 78/233 (33%)
1810009J06RiklNP_775423.1 Tryp_SPc 24..243 CDD:238113 79/235 (34%)

Return to query results.
Submit another query.