DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3916 and Klk1c2

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_036809.1 Gene:Klk1c2 / 24841 RGDID:3888 Length:259 Species:Rattus norvegicus


Alignment Length:289 Identity:83/289 - (28%)
Similarity:136/289 - (47%) Gaps:61/289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQLFCMLLILRQGLADVVTSTTESPTRINGGQRVNE-TVPFQVSLQMQRRGRWQHFCGGSIVSGQ 67
            ||:  :.|:|..|..|   :.....:||.||.:..: :.|:||::..      ::.|||.::...
  Rat     3 LQI--LSLVLSVGRID---AAPPGQSRIVGGYKCEKNSQPWQVAVIN------EYLCGGVLIDPS 56

  Fly    68 HVLTAAHCMEKMKVEDVSVVVGTLN-WKAGGLRHRLVTKHV--HPQYSMNPRII----------- 118
            .|:|||||..    .:..|::|..| :|......|.:.:..  ||.|.  |.|:           
  Rat    57 WVITAAHCYS----NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYI--PLIVTNDTEQPVHDH 115

  Fly   119 -NDIALVKVTPPFRLERSDISTILIGGSDRIGEKVPVR---------LTGWGSTSPSTSSATLPD 173
             ||:.|:.::.|     :||:    ||...|  .:|.:         .:|||||:|  |...:..
  Rat   116 SNDLMLLHLSEP-----ADIT----GGVKVI--DLPTKEPKVGSTCLASGWGSTNP--SEMVVSH 167

  Fly   174 QLQALNYRTISNEDCNQK-GFRVTRNEICALAVQ-GQGACVGDSGGPLIRPGKQPHLVGIVSYGS 236
            .||.:|...:|||.|.:. ...||...:||..:: |:..|.||||||||..|.   |.||.|.|:
  Rat   168 DLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLICDGV---LQGITSGGA 229

  Fly   237 STCAQGR-PDVYTRVSSFLPYISQVINQD 264
            :.||:.: |.:|.::..|..:|.:|:.::
  Rat   230 TPCAKPKTPAIYAKLIKFTSWIKKVMKEN 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 75/254 (30%)
Klk1c2NP_036809.1 Tryp_SPc 24..251 CDD:214473 75/254 (30%)

Return to query results.
Submit another query.