DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3916 and svh-1

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:251 Identity:75/251 - (29%)
Similarity:122/251 - (48%) Gaps:33/251 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RINGGQRVNETVP--FQVSLQMQRRGRWQHFCGGSIVSGQHVLTAAHCMEK-MKVEDVSVVVGTL 91
            |:.||   .||||  |..:..::.:....|.||.||:...|::|||||.|: .:|....||||  
 Worm   712 RVVGG---FETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVG-- 771

  Fly    92 NW---KAGGLRHRLVTKHVH--PQYSMNPRIINDIALVKVTPPFRLERSDIS-TILIGGSDRIGE 150
            :|   :..|.......:.:|  |.|  .....:|||::::..| .:|.::.: .|.:...|.:  
 Worm   772 DWDNNQTDGNEQIFYLQRIHFYPLY--KDIFSHDIAILEIPYP-GIEFNEYAQPICLPSKDFV-- 831

  Fly   151 KVPVR---LTGWGSTSPSTSSATLPDQLQALNYRTISNEDC---NQKGFRVTRNEICALAVQGQ- 208
            ..|.|   ::||||     ......::|||.....|:..||   :|....::|:..||..::|. 
 Worm   832 YTPGRQCVVSGWGS-----MGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGI 891

  Fly   209 GACVGDSGGPLI--RPGKQPHLVGIVSYGSSTCAQGRPDVYTRVSSFLPYISQVIN 262
            .:|.||||||..  |......|.|::|:|.....:.:|.:||.|:.:|.:||.:||
 Worm   892 DSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 71/244 (29%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 72/246 (29%)
Blue background indicates that the domain is not in the aligned region.

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