DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3916 and Tmprss2

DIOPT Version :10

Sequence 1:NP_650167.1 Gene:CG3916 / 41484 FlyBaseID:FBgn0038003 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:263 Identity:82/263 - (31%)
Similarity:113/263 - (42%) Gaps:62/263 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TRINGGQRVNE-TVPFQVSLQMQRRGRWQHFCGGSIVSGQHVLTAAHCMEKMKVEDVSVVVGTLN 92
            :||.||...:. ..|:||||.:|    ..|.|||||::.:.::|||||:|    |.:|   ....
  Rat   252 SRIVGGSTASPGDWPWQVSLHVQ----GIHVCGGSIITPEWIVTAAHCVE----EPLS---SPRY 305

  Fly    93 WKA-----------GGLRHRLVTKHVHPQYSMNPRIINDIALVKVTPPFRLERSDISTILIGGSD 146
            |.|           .|.||::.....||.|....: .|||||:|:..|  |..:|:..       
  Rat   306 WTAFAGILKQSLMFYGSRHQVEKVISHPNYDSKTK-NNDIALMKLQTP--LAFNDVVK------- 360

  Fly   147 RIGEKVPVRL---------------TGWGSTSPSTSSATLPDQLQALNYRTISNEDCNQK---GF 193
                  ||.|               :|||:|.....::   |.|.|.....|....||.|   ..
  Rat   361 ------PVCLPNPGMMLDLAQECWISGWGATYEKGKTS---DVLNAAMVPLIEPSKCNSKYIYNN 416

  Fly   194 RVTRNEICALAVQGQ-GACVGDSGGPLIRPGKQP-HLVGIVSYGSSTCAQGRPDVYTRVSSFLPY 256
            .:|...|||..:||. .:|.|||||||:....:. .|:|..|:||......||.||..|:.|..:
  Rat   417 LITPAMICAGFLQGSVDSCQGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDW 481

  Fly   257 ISQ 259
            |.|
  Rat   482 IYQ 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3916NP_650167.1 Tryp_SPc 30..257 CDD:214473 80/258 (31%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 81/261 (31%)
Blue background indicates that the domain is not in the aligned region.

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