DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and SET2

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_012367.2 Gene:SET2 / 853271 SGDID:S000003704 Length:733 Species:Saccharomyces cerevisiae


Alignment Length:228 Identity:66/228 - (28%)
Similarity:97/228 - (42%) Gaps:49/228 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 CKCTEDTEE-----CTASTKCCARFAGELFAYERSTRRLRLRPGSAIYEC-NSRC-SCDSSCSNR 469
            |.|.|:..:     |...:.|..|.                    .:.|| |..| ||.:.|.|:
Yeast    68 CDCYEEFSDGVNHACDEDSDCINRL--------------------TLIECVNDLCSSCGNDCQNQ 112

  Fly   470 LVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFD 534
            ..|..:..|:.:|||.: .|:||||...:...:|:.||.||:|...|..:|...||.....:.: 
Yeast   113 RFQKKQYAPIAIFKTKH-KGYGVRAEQDIEANQFIYEYKGEVIEEMEFRDRLIDYDQRHFKHFY- 175

  Fly   535 LDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWI--EHLNVALPHLVFFTLRPIKAGEE 597
              :...|:.|: |||...|:::.|.||||.|| |....|:  :.|.:.:     |..|.|..|||
Yeast   176 --FMMLQNGEF-IDATIKGSLARFCNHSCSPN-AYVNKWVVKDKLRMGI-----FAQRKILKGEE 231

  Fly   598 LSFDYIRADNEDVPYENLSTAVRVECRCGADNC 630
            ::|||    |.|     ...|...:|.|...||
Yeast   232 ITFDY----NVD-----RYGAQAQKCYCEEPNC 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991
PreSET 362..455 CDD:128744 6/47 (13%)
SET 477..609 CDD:214614 45/133 (34%)
SET2NP_012367.2 AWS 64..119 CDD:197795 15/70 (21%)
SET_SETD2 119..260 CDD:380949 51/157 (32%)
SET 215..695 CDD:225491 17/55 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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