DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and SUVR1

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_171901.3 Gene:SUVR1 / 839320 AraportID:AT1G04050 Length:734 Species:Arabidopsis thaliana


Alignment Length:733 Identity:167/733 - (22%)
Similarity:258/733 - (35%) Gaps:248/733 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KNELERNITIKLERLSEKKIKNLLTSKQQRQQYE----IKQRSMLRHLAELRRHSRFRRLCTKPA 129
            ||:.|..   |.::..|||.:::.||:.:|:..|    .::..|......|:|..|.||    ..
plant    65 KNKKEEE---KKKKEEEKKSRSVATSRGRRKAPEPLVQDEEDDMDEDEFPLKRRLRSRR----GR 122

  Fly   130 SSSMPASTSSVD-----------------------RRTTRRS-------TSQTSLSPSNSS---- 160
            :||..:|:||.:                       :|..||:       |...:.|||:||    
plant   123 ASSSSSSSSSYNNEDLKTQPEEEDEDDGVTELPPLKRYVRRNGERGLAMTVYNNASPSSSSRLSM 187

  Fly   161 ----------------------GYGSVFGCEEHDVDKIPSLNGFAKLKRRRSSCVGAPTPNSKRS 203
                                  ....|...:|.::|..|.:          |.......|..:..
plant   188 EPEEVPPMVLLPAHPMETKVSEASALVILNDEPNIDHKPVI----------SDTGNCSAPMLEMG 242

  Fly   204 KNNMGV------------------IAKRPPKGEYVVERIECVEMD-------------QYQPVFF 237
            |:|:.|                  ::.....||....::....::             .:.|.  
plant   243 KSNIHVQEWDWETKDILNDTTAMDVSPSSAIGESSEHKVAAASVELASSTSGEAKICLSFAPA-- 305

  Fly   238 VKWLGYHDSENTWESLANVAD--------CAEMEKFVERH-------QQLYEIYI--AKITTELE 285
                   ..|.|...|.::.|        |.:..|.|...       :.:...||  ||.:|.  
plant   306 -------TGETTNLHLPSMEDLRRAMEEKCLKSYKIVHPEFSVLGFMKDMCSCYIDLAKNSTS-- 361

  Fly   286 KQLEALPLMENITVAEV----DAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKR 346
                  .|:|..||.::    |....:.:.:.|:::.:...:|.         |.:|:.:|:   
plant   362 ------QLLETETVCDMSKAGDESGAVGISMPLVVVPECEISGD---------GWKAISNMK--- 408

  Fly   347 AQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVG 411
                      |:...|:   :||.|     ..|.|: :.:.|.|.|:..:.:.:|.|.    |..
plant   409 ----------DITAGEE---NVEIP-----WVNEIN-EKVPSRFRYMPHSFVFQDAPV----IFS 450

  Fly   412 CKCTEDTEECTASTKC------------CARFAGELFAY-------------------------- 438
            .....|.:.|  ||.|            ||......|||                          
plant   451 LSSFSDEQSC--STSCIEDCLASEMSCNCAIGVDNGFAYTLDGLLKEEFLEARISEARDQRKQVL 513

  Fly   439 --------ERSTRRLRLRP------GSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSG 489
                    ||:.:...|.|      ..||.||..:|.|...|.||:||.|....|.:|.|.||.|
plant   514 RFCEECPLERAKKVEILEPCKGHLKRGAIKECWFKCGCTKRCGNRVVQRGMHNKLQVFFTPNGKG 578

  Fly   490 WGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGR-TYLFDLDYNTAQ----DSEYTIDA 549
            ||:|....|.||.|:|||||||:|..|..:|  :::|... ..:.|..:.:.:    |....:|.
plant   579 WGLRTLEKLPKGAFICEYIGEILTIPELYQR--SFEDKPTLPVILDAHWGSEERLEGDKALCLDG 641

  Fly   550 ANYGNISHFINHSC-DPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDYIRADNEDVPYE 613
            ..|||||.|:||.| |.||...|..:|..:....||.|||.|.|:|.|||::|| ..|..|    
plant   642 MFYGNISRFLNHRCLDANLIEIPVQVETPDQHYYHLAFFTTRDIEAMEELAWDY-GIDFND---- 701

  Fly   614 NLSTAVRVECRCGADNCR 631
            |.|.....:|.||:..||
plant   702 NDSLMKPFDCLCGSRFCR 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362 3/10 (30%)
Chromo 219..268 CDD:459793 8/69 (12%)
SET_SUV39H 388..634 CDD:380940 95/302 (31%)
SUVR1NP_171901.3 WIYLD 6..59 CDD:431288
SET_SETDB-like 433..696 CDD:380936 85/271 (31%)
Blue background indicates that the domain is not in the aligned region.

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