Protein Alignment Su(var)3-9 and SUVH1

DIOPT Version :10

• Sequence 1: NP_524357.2
• Gene: Su(var)3-9 / 41483
• FlyBaseID: FBgn0263755
• Length: 635
• Species: Drosophila melanogaster
• Sequence 2: NP_196113.1
• Gene: SUVH1 / 830376
• AraportID: AT5G04940
• Length: 670
• Species: Arabidopsis thaliana
• Alignment Length: 629
• Identity: 144/629 - (22%)
• Similarity: 225/629 - (35%)
• Gaps: 197/629 - (31%)

  Fly   115 LRRHSRFRRLCTKPASSSMPASTSSVDRR---------------TTRRSTSQTSLSPSNSSGYGS 164
            ::|....:|..::|.:.:..:..:..||.               ..||..:|...:....||
plant   123 VKRRIPKKRPISRPENMNFESGINVADRENGNRELVLSVLMRFDALRRRFAQLEDAKEAVSG--- 184

  Fly   165 VFGCEEHDVDKIPSLNGFAKLKRRRSSCVG-APTPNSKRSKNNMGVIAKRPPKGEYVVERIECVE 228
                    :.|.|.|       :..|:|:| ....|:|          |||.    :|..:|..:
plant   185 --------IIKRPDL-------KSGSTCMGRGVRTNTK----------KRPG----IVPGVEIGD 220

  Fly   229 MDQYQPVFFVKW----LGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTELEKQLE 289
                  |||.::    :|.|.     .|:|.:                 :..:.|..||.|
plant   221 ------VFFFRFEMCLVGLHS-----PSMAGI-----------------DYLVVKGETEEE---- 253

  Fly   290 ALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKI--GERAL-KSMQ-------- 343
              |:..:|..:.....:..|..: ||...|...|....|...||:  |..|| ||::
plant   254 --PIATSIVSSGYYDNDEGNPDV-LIYTGQGGNADKDKQSSDQKLERGNLALEKSLRRDSAVRVI 315

  Fly   344 --IKRAQFVRRKQLADLALFEKRMNHVEK------------------------------------ 370
              :|.|....:..:.| .|:|.:.:.|||
plant   316 RGLKEASHNAKIYIYD-GLYEIKESWVEKGKSGHNTFKYKLVRAPGQPPAFASWTAIQKWKTGVP 379

  Fly   371 --------------PSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEEC 421
                          .|.|:.:.|.:|.|...:.|.| ...:...:..|......||.|....:..
plant   380 SRQGLILPDMTSGVESIPVSLVNEVDTDNGPAYFTY-STTVKYSESFKLMQPSFGCDCANLCKPG 443

  Fly   422 TASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTAN 486
            .....|..:..|: |.|..:...:..:|  .||||:..|.| |:|.|::.|.|.:|.|.:|||||
plant   444 NLDCHCIRKNGGD-FPYTGNGILVSRKP--MIYECSPSCPC-STCKNKVTQMGVKVRLEVFKTAN 504

  Fly   487 GSGWGVRAATALRKGEFVCEYIGEIITSDEANERGK-----AYDDNGRTYLFDLD--YN------ 538
             .|||:|:..|:|.|.|:|.|:|      ||.::.|     |.||    |.||..  ||
plant   505 -RGWGLRSWDAIRAGSFICIYVG------EAKDKSKVQQTMANDD----YTFDTTNVYNPFKWNY 558

  Fly   539 ------------TAQDSE----YTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFF 587
                        .:::||    ..|.|.|.||::.|:||||.||:...|...|:.:....|:.||
plant   559 EPGLADEDACEEMSEESEIPLPLIISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFF 623

  Fly   588 TLRPIKAGEELSFDYIRADNEDVPYENLSTAVRVECRCGADNCR 631
            .:..|....||::||..:........|.....| :|.||:..||
plant   624 AISHIPPMTELTYDYGVSRPSGTQNGNPLYGKR-KCFCGSAYCR 666

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(var)3-9	NP_524357.2	PTZ00327	11..>80	CDD:240362
		Chromo	219..268	CDD:459793	9/52 (17%)
		SET_SUV39H	388..634	CDD:380940	82/273 (30%)
SUVH1	NP_196113.1	SRA	207..361	CDD:197742	40/203 (20%)
		SET_AtSUVH-like	409..640	CDD:380943	75/246 (30%)