DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and SDG21

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_180049.2 Gene:SDG21 / 817010 AraportID:AT2G24740 Length:755 Species:Arabidopsis thaliana


Alignment Length:332 Identity:89/332 - (26%)
Similarity:135/332 - (40%) Gaps:114/332 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 LADLALFEKRM-----NHVEKPSPPI-------------RVENNIDLDTIDSNFMYIHDNIIGKD 401
            |.||:..|:.:     |.|::....|             .:.|::::|:......|||.|     
plant   479 LGDLSFGEEGLRVPLVNEVDEEDKTIPDDFDYIRSQCYSGMTNDVNVDSQSLVQSYIHQN----- 538

  Fly   402 VPKPEAGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSC 466
                               ||...|.|    |:| .|..:....| :|  .||||.      .||
plant   539 -------------------CTCILKNC----GQL-PYHDNILVCR-KP--LIYECG------GSC 570

  Fly   467 SNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTY 531
            ..|:|:.|.::.|.:|||:| .|||:|:...:|.|.|:||:.|...|.:|..|     ||:   |
plant   571 PTRMVETGLKLHLEVFKTSN-CGWGLRSWDPIRAGTFICEFTGVSKTKEEVEE-----DDD---Y 626

  Fly   532 LFDLD--YNT------------------AQD----SEYTIDAANYGNISHFINHSCDPNLAVFPC 572
            |||..  |::                  ::|    ::..|.|...||:..|:||:|.||  ||  
plant   627 LFDTSRIYHSFRWNYEPELLCEDACEQVSEDANLPTQVLISAKEKGNVGRFMNHNCWPN--VF-- 687

  Fly   573 W--IE------HLNVALPHLVFFTLRPIKAGEELSFDY----IRADNED-VPYENLSTAVRVECR 624
            |  ||      |:.|   .:..|.::.|....||::||    :....|| |.|:.     :..|.
plant   688 WQPIEYDDNNGHIYV---RIGLFAMKHIPPMTELTYDYGISCVEKTGEDEVIYKG-----KKICL 744

  Fly   625 CGADNCR 631
            ||:..||
plant   745 CGSVKCR 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 80/281 (28%)
SDG21NP_180049.2 PHA03309 <68..225 CDD:165564
SRA 305..452 CDD:197742
PreSET 479..571 CDD:128744 27/129 (21%)
SET 539..723 CDD:394802 66/213 (31%)
Blue background indicates that the domain is not in the aligned region.

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