DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and SUV39H2

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001180353.1 Gene:SUV39H2 / 79723 HGNCID:17287 Length:410 Species:Homo sapiens


Alignment Length:487 Identity:170/487 - (34%)
Similarity:245/487 - (50%) Gaps:101/487 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 GCEEHDVDKIP---SLNGFAKL-KRRRSSC--VGAPTPNSKRSKNNMGVIAKRPPKGEYVVERIE 225
            |.|......:|   ||:...:| ::.:.:|  :|.    :||:.||..|        ||:.:...
Human     5 GAEARGAWCVPCLVSLDTLQELCRKEKLTCKSIGI----TKRNLNNYEV--------EYLCDYKV 57

  Fly   226 CVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFV-ERHQQLYEIYIAKITTELEKQLE 289
            ..:|:.|    .|||.|:.||.||||.|.|:.....:::|. ::|..|.::...|..|..:....
Human    58 VKDMEYY----LVKWKGWPDSTNTWEPLQNLKCPLLLQQFSNDKHNYLSQVKKGKAITPKDNNKT 118

  Fly   290 ALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVRRKQ 354
            ..|     .:||.           ::..|:.|.|..|.|.|                        
Human   119 LKP-----AIAEY-----------IVKKAKQRIALQRWQDE------------------------ 143

  Fly   355 LADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGI-------VGC 412
                  ..:|.||    ...|.|||.:||:...|:|.||::.       ||..||       .||
Human   144 ------LNRRKNH----KGMIFVENTVDLEGPPSDFYYINEY-------KPAPGISLVNEATFGC 191

  Fly   413 KCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQV 477
            .||    :|... |||...||.|.||.:: :::::.||:.||||||||.|...|.||:||.|.|.
Human   192 SCT----DCFFQ-KCCPAEAGVLLAYNKN-QQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQY 250

  Fly   478 PLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQD 542
            .|.:|:|:||.||||:....:::..||.||:||:|||:||..||:.||:.|.||||||||   :.
Human   251 SLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDY---ES 312

  Fly   543 SEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDYIRADN 607
            .|:|:|||.|||:|||:||||||||.||..:|::|:..||.:..|:.|.|.|||||:|||....:
Human   313 DEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGS 377

  Fly   608 EDVPYENLSTA-----VRVECRCGADNCRKVL 634
            .|:..:::..:     ||..|:|||..||..|
Human   378 GDISSDSIDHSPAKKRVRTVCKCGAVTCRGYL 409

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991 17/51 (33%)
PreSET 362..455 CDD:128744 33/99 (33%)
SET 477..609 CDD:214614 69/131 (53%)
SUV39H2NP_001180353.1 CD_SUV39H1_like 47..95 CDD:349289 18/59 (31%)
SET_SUV39H2 167..409 CDD:380930 117/257 (46%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000269|PubMed:20084102, ECO:0007744|PDB:2R3A 261..263 0/1 (0%)