DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and nsd1b

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_005173940.1 Gene:nsd1b / 564592 ZFINID:ZDB-GENE-080519-2 Length:1873 Species:Danio rerio


Alignment Length:348 Identity:88/348 - (25%)
Similarity:141/348 - (40%) Gaps:83/348 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 QLEALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVR 351
            |....|.||    .:.::.|.:...:|    :.|:.|          :.|.||:..:::..:.:|
Zfish  1362 QARVFPYME----GDANSKEKMGKGVD----STYKKA----------LDEAALRFKELQAEKELR 1408

  Fly   352 RKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTE 416
            :.|       |.|.|  :|..||.:   .|.::......:.|..::  .::|:     ..||.| 
Zfish  1409 QLQ-------EDRRN--DKKPPPYK---QIKVNKPFGKVLIISADL--SEIPR-----CNCKAT- 1453

  Fly   417 DTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIYECNSR-CSCDSSCSNRLVQHGRQVPLV 480
            |...|...::|..|.                    .:|||:.: |.....|.|:.....:...:.
Zfish  1454 DENPCGMDSECINRM--------------------LLYECHPQVCPAGERCQNQCFIKRQYCQVE 1498

  Fly   481 LFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDN--GRTYLFDLDYNTAQDS 543
            .|:|.: .|||:|....::||.|:.||:||:|..:|...|.|...:|  |..|:..|      |.
Zfish  1499 TFRTLS-RGWGLRCVHDIKKGGFISEYVGEVIDEEECRARIKHAQENNIGNFYMLTL------DK 1556

  Fly   544 EYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLRPIKAGEELSFDYIRADN 607
            :..|||...||.:.|:||.|.||     |..:...| ....:..|:|..|.||.||:|:|     
Zfish  1557 DRIIDAGPKGNEARFMNHCCQPN-----CETQKWTVNGDTRVGLFSLTDIPAGTELTFNY----- 1611

  Fly   608 EDVPYENLSTAVRVECRCGADNC 630
               ..|.|.....| |:|||.||
Zfish  1612 ---NLECLGNGKTV-CKCGASNC 1630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 68/247 (28%)
nsd1bXP_005173940.1 PWWP 130..244 CDD:470613
PHD_SF 1098..1140 CDD:473978
PHD_SF 1145..1191 CDD:473978
PHD_SF 1193..1245 CDD:473978
PHD4_NSD1 1262..1301 CDD:277126
PWWP 1308..1403 CDD:470613 11/58 (19%)
AWS 1454..1492 CDD:465559 10/57 (18%)
SET 1494..1635 CDD:394802 53/158 (34%)
PHD5_NSD1 1668..1710 CDD:277129
C5HCH 1709..1758 CDD:465605
Blue background indicates that the domain is not in the aligned region.

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