DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and setmar

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001107072.1 Gene:setmar / 564575 ZFINID:ZDB-GENE-080204-61 Length:293 Species:Danio rerio


Alignment Length:284 Identity:95/284 - (33%)
Similarity:135/284 - (47%) Gaps:45/284 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 PIRVENNIDLDTIDSNFMYIHDNIIGK--DVPKPEAGIVGCKCTEDTEECTASTKCCARFAGELF 436
            |:.:||::..:.: |.|.|:.:|:.|.  |:......:.||.|.  .:.|......|.|| |:.:
Zfish    16 PVLIENSVPKEAL-SYFQYVPENVQGPGCDLDPNAVTLPGCSCR--VQSCFPERCPCLRF-GQTY 76

  Fly   437 AYERSTRRLRLRPGSA-----IYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAAT 496
               .|...|...|..|     ::|||:.|||..||..|:||:|..|.|.:|.||: .|.||.|..
Zfish    77 ---DSRACLNQHPQDATYSRPVFECNAFCSCGESCQTR
VVQNGVCVRLGVFSTAD-RGLGVEALE 137

  Fly   497 ALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQD--SEYTIDAANYGNISHFI 559
            .|..|.|||||.||:|..|||..|..:.......|:..:..:...|  ::..:|..|.||:..||
Zfish   138 RLPCGRFVCEYAGEVIGIDEARRRQLSQTPLHMNYIIAVQEHKGLDRVTQTFVDPVNLGNVGRFI 202

  Fly   560 NHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDY------------------IRAD 606
            ||||.|||.:.|.   .::..||.|..|..|.|:..|||:|||                  :.||
Zfish   203 NHSCQPNLIMLPV---RVHSVLPRLALFANRDIECYEELTFDYSGGQNSSAETAKLDEETHVGAD 264

  Fly   607 NEDVPYENLSTAVRVECRCGADNC 630
            .|::|.:.:       |||||.||
Zfish   265 GEEIPQKKV-------CRCGASNC 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991
PreSET 362..455 CDD:128744 21/87 (24%)
SET 477..609 CDD:214614 53/151 (35%)
setmarNP_001107072.1 Pre-SET 8..111 CDD:282838 29/101 (29%)
SET 119..243 CDD:214614 50/127 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D753093at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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