DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and ash1l

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_005159540.1 Gene:ash1l / 563799 ZFINID:ZDB-GENE-030131-6101 Length:2988 Species:Danio rerio


Alignment Length:798 Identity:168/798 - (21%)
Similarity:271/798 - (33%) Gaps:273/798 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SNLDVSKLTPLSPEVISRQATINIGTI--GHVAH----GKSTVVKAISGVQ-------TVRFKNE 71
            |:.|.|||:       ..|:....|..  |||.:    .:|....|.|.::       |..|.:.
Zfish  1548 SDTDYSKLS-------RNQSFSGSGAFSEGHVQNPVDCSESDEEDAASPIEEPEISHHTNLFASA 1605

  Fly    72 LERNITIK--------------LERLSEKKIKNLLTSKQQRQ-------QYEIKQRSM------L 109
            |.|. ::|              |.||.....::..||.::|:       |..:.|.|:      |
Zfish  1606 LSRT-SLKGSRSKKGGPLESPSLSRLDRTVRRDRSTSSEKREIGNVSSLQNRVGQSSVPDVSEGL 1669

  Fly   110 RHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTRRSTSQTSLSPSNSSGYGSVFGCEEHDVD 174
            .|   ...|.....|....|:|.:|..|......|.....|....|||..|...:.  |    :|
Zfish  1670 HH---RHHHHHHPPLSLSHAASCLPHCTLDQPGNTAPLRPSSRQASPSTCSSQPAC--C----LD 1725

  Fly   175 KIPS--------------LNGFAKLKRRRSSCVGAPTPNSKRSKNNMGVIAKRPP---------- 215
            ..||              :|...:.|:.:         ...|:.|||  :.||.|          
Zfish  1726 SPPSHLSHRPPPKNNLLHVNKILRAKKLQ---------RQARTGNNM--VKKRGPGRPRKNPLPS 1779

  Fly   216 ---------------------------KGEYVVERIECVEMDQYQPVFFVK-W----LGYHDSEN 248
                                       :.:.||:.||.|..:|.:.....| |    .|..:.|.
Zfish  1780 PPATPPPQTSEQDNHPLPERHRATALWEADTVVDAIEAVVQNQRKKGRKRKHWERETEGGDEEEE 1844

  Fly   249 TWESLANVADCAEMEKFVERHQQ---LYEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNL 310
            ..|....|.| .|.|:..|:.||   ..:..::::.||..:|.        :|..||..:..   
Zfish  1845 DAEEERQVED-EEEEEDEEQEQQSAAREDDVMSRVRTEGSRQW--------LTQEEVHCFRS--- 1897

  Fly   311 QIDLILLAQYRAAGS-----------------RSQRE------PQKIGERA-------------L 339
                  ..:.:..||                 .||||      |:|..::|             .
Zfish  1898 ------ALEGKPDGSPERPGPATSEPTPNPSVTSQREKRVARPPKKKFQKAGLYSDVYKTDDPRS 1956

  Fly   340 KSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGK-DVP 403
            :.:|:|:.:........|..|....: ||.|.....|::..:..|.:   :::.||.:..: |||
Zfish  1957 QLLQLKKEKLEYTPGEHDYGLLPAPI-HVGKYLRQKRIDFQLPYDIL---WLWKHDQLYKRPDVP 2017

  Fly   404 -------------KP----EAGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGS 451
                         ||    ||....|:..:|:.|......|..|.                    
Zfish  2018 LYKKIRSNVYVDVKPLSGYEATTCNCRLPDDSSEKGCQDDCLNRM-------------------- 2062

  Fly   452 AIY-ECN-SRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITS 514
             || ||: |.|.|...|.|:.:|....|..:....|.|.|||:|....||.|:|:.||:||:::.
Zfish  2063 -IYAECSPSTCPCSDQCDNQRIQKHEWVQCLERFRAEGKGWGIRTKQPLRAGQFIIEYLGEVVSE 2126

  Fly   515 DE---------------------------ANERGKAYDDNGRTYLFDLDYNTAQDSEYTIDAANY 552
            .|                           .:...:.|..:...|..:|      ||...||:...
Zfish  2127 QEFRKYIASDCRLHQVKIPMLGENKKQIGVSRMMEQYFSHSGHYCLNL------DSGMVIDSYRM 2185

  Fly   553 GNISHFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLRPIKAGEELSFDYIRADNEDVPYENLS 616
            ||.:.|:||||:||     |.::..:| .:..:..|.|:.|.:|.||::||        .:.:.:
Zfish  2186 GNEARFVNHSCEPN-----CEMQKWSVNGVYRIGLFALKDINSGTELTYDY--------NFHSFN 2237

  Fly   617 TAVRVECRCGADNCRKVL 634
            |..:..|:||::.||.::
Zfish  2238 TEEQQVCKCGSEGCRGII 2255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362 18/86 (21%)
Chromo 219..268 CDD:459793 15/53 (28%)
SET_SUV39H 388..634 CDD:380940 72/293 (25%)
ash1lXP_005159540.1 PHA03307 305..>647 CDD:223039
PHA03247 <480..906 CDD:223021
CytochromB561_N <540..>674 CDD:480696
AWS 2037..2088 CDD:197795 17/71 (24%)
SET_ASH1L 2091..2257 CDD:380951 47/184 (26%)
COG5076 2281..>2500 CDD:227408
Bromo_ASH1 2408..2513 CDD:99955
PHD_ASH1L 2559..2601 CDD:277023
BAH_polybromo 2633..2772 CDD:240068
Blue background indicates that the domain is not in the aligned region.

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