DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and kmt2a

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_005157640.1 Gene:kmt2a / 557048 ZFINID:ZDB-GENE-080521-3 Length:4219 Species:Danio rerio


Alignment Length:701 Identity:152/701 - (21%)
Similarity:240/701 - (34%) Gaps:213/701 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LSNLDVSKLTPLSPEVISRQATINIGT--IGHVAHGKSTVVKAISGV------QTVRFKNELERN 75
            |||| :.|..|.:..:..:...::.||  :.|:.:...|.:.:...|      .||....::|:.
Zfish  3646 LSNL-LIKANPHNLSLSEQPMVLHPGTPMMSHLTNPAQTSIASSICVFPPNQSITVPVNQQVEKE 3709

  Fly    76 ITIKLER-----LSEKKIKNLLTSKQQRQ------QYEIKQRSMLRHLAELRRHSRFRRLCTKPA 129
            .|:.|:.     |::|.:...::|..|..      ..|:.:..::..|.:..|.|...|...:..
Zfish  3710 GTVHLQHAVSRVLADKTLDPNVSSAGQVALAPNPISQELNKGHVVSVLTQSSRTSPISRPQHQHQ 3774

  Fly   130 SSSMPASTSSV-----------------------------DRRTTRRSTSQTSL--------SPS 157
            :|.:||..|||                             |..|...|..|.|.        ||.
Zfish  3775 ASKLPAGASSVAFGKGKHKAKRPRPCPDKSSGKKHKGLHSDTPTVDTSAIQLSYIKGDQELSSPE 3839

  Fly   158 -NSSGYGSVFGCEEHD------------------VDKIPSLNGF-AKLKRRRSSCVGAPTPNSKR 202
             ..:|..:..|.::.|                  ||:.||..|. :|.....:......||:.:.
Zfish  3840 PMDTGQSNETGSKKRDSTTMTTNSSALKRKTVDAVDEKPSTAGLPSKGDGTGNKAFSVDTPDQRD 3904

  Fly   203 SKNNMGVIAKRPPKGEYVVERIECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVE 267
            |..:.. :..:|.||..    .|....|.:|       :.....|..|:||              
Zfish  3905 SGRDSS-LDHKPKKGLI----FEICSDDGFQ-------IRCESIEEAWKSL-------------- 3943

  Fly   268 RHQQLYEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNLQIDLI--LLAQ-YRAAGSRSQR 329
                          |:..::..:...::.::...|:..:.|.:..|.:  ||.| |.|...|:.|
Zfish  3944 --------------TDKVQEARSNARLKALSFDGVNGLKMLGVVHDAVVFLLEQLYGARHCRNYR 3994

  Fly   330 ----EPQKIGERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNF 390
                :|::.....:......||:...||.:.|:..|....:.    .||                
Zfish  3995 FRFHKPEETDYLPVNPHGSARAEVYHRKSVLDMFNFLASKHR----QPP---------------- 4039

  Fly   391 MYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIYE 455
                       |..|:        .||.||  ...|...|............|:|:         
Zfish  4040 -----------VYNPQ--------EEDEEE--MQQKSARRATSTDLPLPEKFRQLK--------- 4074

  Fly   456 CNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANER 520
               :.|.|:....|...|||               |:.....:..||.|.||.|.:|.|...::|
Zfish  4075 ---KASRDAVGVYRSAIHGR---------------GLFCRKNIEPGEMVIEYSGNVIRSVLTDKR 4121

  Fly   521 GKAYDDNG-RTYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNV-ALPH 583
            .|.|||.| ..|:|.:|     |.| .:||..:||.:.||||||:||     |:...:|| ...|
Zfish  4122 EKYYDDKGIGCYMFRID-----DYE-VVDATIHGNSARFINHSCEPN-----CYSRVVNVDGQKH 4175

  Fly   584 LVFFTLRPIKAGEELSFDYIRADNEDVPYENLSTAVRVECRCGADNCRKVL 634
            :|.|..|.|..||||::||      ..|.|....  ::.|.|||..|||.|
Zfish  4176 IVIFATRKIYKGEELTYDY------KFPIEEPGN--KLPCNCGAKKCRKFL 4218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362 15/68 (22%)
Chromo 219..268 CDD:459793 7/48 (15%)
SET_SUV39H 388..634 CDD:380940 71/247 (29%)
kmt2aXP_005157640.1 zf-CXXC 1312..1359 CDD:366873
PHD1_KMT2A 1627..1673 CDD:277063
PHD2_KMT2A 1675..1724 CDD:277065
PHD3_KMT2A 1762..1818 CDD:277067
Bromo_ALL-1 1841..1971 CDD:99925
ePHD_KMT2A 2066..2178 CDD:277163
FYRN 2219..2266 CDD:461787
Atrophin-1 3221..>3709 CDD:460830 14/63 (22%)
FYRC 3919..4002 CDD:197781 19/121 (16%)
SET_KMT2A 4066..4219 CDD:380983 64/199 (32%)
Blue background indicates that the domain is not in the aligned region.

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