DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and suv39h1a

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001003592.1 Gene:suv39h1a / 445198 ZFINID:ZDB-GENE-040801-111 Length:411 Species:Danio rerio


Alignment Length:453 Identity:177/453 - (39%)
Similarity:224/453 - (49%) Gaps:97/453 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 SKNNMGVIAKRPPKGEYVVERIECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVE 267
            :|||.         .:|.||.:...:..:.:..|.|||.||.:||||||.|.|: .|.     :.
Zfish    36 TKNNF---------NDYEVEYLCNYKKHKGREFFLVKWKGYEESENTWEPLKNL-KCP-----IL 85

  Fly   268 RHQQLYEIYIAKITTELEKQLEALPLMENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQ 332
            .||             ..|.::|..|..|         |||:               |.|...| 
Zfish    86 LHQ-------------FRKDMKAALLQAN---------EPLD---------------SASLSGP- 112

  Fly   333 KIGERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNI 397
                 .:..::.|..|.:|.|:..||      ||...:....|.|.|.:|||....||.||::|.
Zfish   113 -----IISFLRQKATQRIRLKKWEDL------MNQTCRHKGRIFVSNEVDLDGPPKNFTYINENK 166

  Fly   398 IGKDVPKPEAGIVGCKCTEDTEECTAS--TKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRC 460
            :||.|.. .|.||||:|.    :|.:.  ..||........||..| ||:::.||..||||||:|
Zfish   167 LGKGVDM-NAVIVGCECA----DCVSQPVDGCCPGLLKFRRAYNES-RRVKVMPGVPIYECNSKC 225

  Fly   461 SCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANERGKAYD 525
            .|...|:||:||.|.|..|.:|||.||.|||||....:.|..||.||:|||||:|||..||..||
Zfish   226 RCGPDCANRVVQRGIQYDLCIFKTDNGRGWGVRTLQRINKNSFVMEYLGEIITTDEAERRGVLYD 290

  Fly   526 DNGRTYLFDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLR 590
            ..|.||||||||   .|..||||||:|||||||:||||||||.|:..:|::|:..||.:..|..|
Zfish   291 KQGVTYLFDLDY---VDDVYTIDAAHYGNISHFVNHSCDPNLQVYNVFIDNLDERLPRIALFAKR 352

  Fly   591 PIKAGEELSFDY------------------IRADNEDVPYENLSTAVRVECRCGADNCRKVLF 635
            .|||||||:|||                  .||..|..|.:.    |.:||:||..||||.||
Zfish   353 GIKAGEELTFDYKMTVDPVDAESTKMDLDFSRAGIEGSPIKR----VHMECKCGVRNCRKYLF 411

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991 18/50 (36%)
PreSET 362..455 CDD:128744 33/94 (35%)
SET 477..609 CDD:214614 78/149 (52%)
suv39h1aNP_001003592.1 Chromo 44..91 CDD:278797 19/65 (29%)
Pre-SET 139..234 CDD:282838 39/100 (39%)
SET 242..365 CDD:214614 75/125 (60%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 253..255 0/1 (0%)