DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and PR-Set7

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001247100.1 Gene:PR-Set7 / 41743 FlyBaseID:FBgn0011474 Length:691 Species:Drosophila melanogaster


Alignment Length:672 Identity:137/672 - (20%)
Similarity:225/672 - (33%) Gaps:207/672 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLE----RLSEKKIKNL 91
            |.:.|..:..:|:|.                  |.::..:| |.|..|||:    :|::|:|...
  Fly   111 SQKTIHTEEQLNLGN------------------QELKLDDE-ELNGQIKLDDEVLKLADKQINEN 156

  Fly    92 LTSKQQ---RQQYEIKQRSMLRHLAELRRHSRFRRLCTKPASSSMPASTSSVD-----RRT---- 144
            |....:   :.:.::....:.:.:.||......|      |||:.|.....:|     ::|    
  Fly   157 LPFADEVDAKAEQKLMDEELQQVVEELLFDGSSR------ASSNSPFYQHDMDVMQEIQQTPEIP 215

  Fly   145 -------------------TRRSTSQTSLSPSNSSGYGSVFGCE---EHDVDKIPSLNGFAKLKR 187
                               |.||..:.|.|.::||...::|..|   ..|:|:.|:.....|:  
  Fly   216 HIKKVTEPLEGLGSLADFQTHRSALRDSHSSTHSSSTDNIFLQEPVLTLDIDRTPTKASSIKI-- 278

  Fly   188 RRSSCVGAPTPNSKRSKNNMGVIAKRPP-------KGEY--VVE---RIECVEMDQYQPVFFVKW 240
                         .||....|.:...||       .|.:  :|.   :.|.:::..:.       
  Fly   279 -------------NRSFELAGAVFSSPPSVLNACLNGRFNQIVSLNGQKEALDLPHFD------- 323

  Fly   241 LGYHDSENTWESLA--------NVADCAEMEKFVERHQQLYEIYI---AKITTELEKQLEALPLM 294
            |..|||.:....:|        :.|......|....|:.|....|   .|:|..:.|...|.||.
  Fly   324 LDQHDSSSCDSGVACGLTANTESPAGQPRRRKPATPHRILCPSPIKTALKVTGGICKVGSADPLS 388

  Fly   295 ENITVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVRRKQLAD-- 357
            ..        ..|..|......:|..::....:|.:||     |....|:::....:::|..|  
  Fly   389 PR--------KSPRKLPTTTAAVAACKSRRRLNQPKPQ-----APYQPQLQKPPSQQQQQQQDDI 440

  Fly   358 --------------------LALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDV 402
                                :...|:|.|..:.|:            |.:||...:...:....|
  Fly   441 VVVLDDDDDEGDDEDDVRALIKAAEERENQNKAPA------------TANSNKAGMKTMLKPAPV 493

  Fly   403 --------------PKPEAGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAI 453
                          |.|.|      .|....|.|           :.|...||.|:.:.......
  Fly   494 KSKTKSKGPTKGQPPLPLA------ATNGNREMT-----------DFFPVRRSVRKTKTAVKEEW 541

  Fly   454 YECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEAN 518
            .....:...:..|....|:|           ..|.|.||.|....::.|||.||:|::|:..||.
  Fly   542 MRGLEQAVLEERCDGLQVRH-----------FMGKGRGVVADRPFKRNEFVVEYVGDLISIGEAA 595

  Fly   519 ERGKAY--DDNGRTYLFDLDYNTAQDSEYTIDA-ANYGNISHFINHSCDPNLAVFPCWIEHLNVA 580
            ||.|.|  |:|...|::   |...:..:|.||| .:.|.:...||||...||......|:.    
  Fly   596 EREKRYALDENAGCYMY---YFKHKSQQYCIDATVDTGKLGRLINHSRAGNLMTKVVLIKQ---- 653

  Fly   581 LPHLVFFTLRPIKAGEELSFDY 602
            .||||......|:.||||::||
  Fly   654 RPHLVLLAKDDIEPGEELTYDY 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359 7/38 (18%)
CHROMO 217..268 CDD:237991 10/63 (16%)
PreSET 362..455 CDD:128744 18/106 (17%)
SET 477..609 CDD:214614 45/129 (35%)
PR-Set7NP_001247100.1 SET 566..676 CDD:279228 44/117 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467615
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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