DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(var)3-9 and ash1

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001246834.1 Gene:ash1 / 40133 FlyBaseID:FBgn0005386 Length:2226 Species:Drosophila melanogaster


Alignment Length:756 Identity:153/756 - (20%)
Similarity:256/756 - (33%) Gaps:203/756 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DLSNLDVSKLTPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR--------FKNELER 74
            |.:::...||..:||   |...::.....|..|..|.:..|.:..:|:..        |:..:|.
  Fly   838 DNNSISGGKLLDISP---SSLCSLKQQRRGGAAKQKVSAAKDLVQLQSPAGSYPPPGVFEPSVEL 899

  Fly    75 NITIKLERLSEKKIKNLLTSKQQRQQYEIKQ---RSMLRHLAELRRHSRFRRLCTKPASSSMPAS 136
            .|.|.|.:|:|..|.............:||:   :.:.:.:.|...|.....|..|.....:..:
  Fly   900 EIQIPLSKLNESVITKAEVESPLLSALDIKEDTKKEVGQRVVETLLHKTGGNLLLKRKRKKINRT 964

  Fly   137 TSSVDRRTTRRST--SQT-------------------SLSPSNSSGYGSVFGCEEHDVD------ 174
            .....||..|:.:  .||                   ||..:.||...:|.......:|      
  Fly   965 GFPTVRRKKRKVSVEQQTTAVIDEHEPEFDPDDEPLQSLRETRSSNNVNVQAAPNPPLDCERVPQ 1029

  Fly   175 --------------KIPSLNGFA--KLKRRRSSCVGAPTPNSKRSKNNMGVIAKRPPKGEYVVER 223
                          |.|.|:..|  :|:|.::...|.|.....:::.......:.|||.|..:..
  Fly  1030 AGEARETFVARTNQKAPRLSVVALERLQRPQTPARGRPRGRKPKNREQAEAAPQPPPKSEPEIRP 1094

  Fly   224 IECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYE------IYIAKITT 282
            .:.......|||.              |.........:.:..:|.:.:|.:      .:..||..
  Fly  1095 AKKRGRQPKQPVL--------------EEPPPTPPPQQKKNKMEPNIRLPDGIDPNTNFSCKIRL 1145

  Fly   283 ELEKQLEA---------------------LPLMENITVAEVDA--YEPLNLQIDLILLAQYRAAG 324
            :..|.|||                     :|:.:....||.:|  .:.:..:.|.:..::....|
  Fly  1146 KRRKNLEAGTQPKKEKPVQPVTVEEIPPEIPVSQEEIDAEAEAKRLDSIPTEHDPLPASESHNPG 1210

  Fly   325 SRSQREPQKIGERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEK------------------- 370
            .:......:..|....:..:::...|::..|. ..||.   ||.::                   
  Fly  1211 PQDYASCSESSEDKASTTSLRKLSKVKKTYLV-AGLFS---NHYKQSLMPPPAKVNKKPGLEEQV 1271

  Fly   371 ------PSPPI------RVENNIDL----------------DTIDS-NFMYIHDNIIGKDVPKPE 406
                  |.||.      |.|.:.:|                :.:.| |:..|..|:..:.|....
  Fly  1272 GPASLLPPPPYCEKYLRRTEMDFELPYDIWWAYTNSKLPTRNVVPSWNYRKIRTNVYAESVRPNL 1336

  Fly   407 AGIVGCKCTEDTEECTASTKCCARFAGELFAYERSTRRLRLRPGSAIY-ECN-SRCSCDSSCSNR 469
            ||.       |...|....:      ||....:....|:       :| ||: |.|.....|.|:
  Fly  1337 AGF-------DHPTCNCKNQ------GEKSCLDNCLNRM-------VYTECSPSNCPAGEKCRNQ 1381

  Fly   470 LVQHGRQVPLV-LFKTANGSGWGVRAATALRKGEFVCEYIGEIITSDEANER-GKAYDDNGRTYL 532
            .:|.....|.| .|.||: .|||||....:.||.::.||:||::|..|..:| ...|.::...|.
  Fly  1382 KIQRHAVAPGVERFMTAD-KGWGVRTKLPIAKGTYILEYVGEVVTEKEFKQRMASIYLNDTHHYC 1445

  Fly   533 FDLDYNTAQDSEYTIDAANYGNISHFINHSCDPNLAVFPCWIEHLNV-ALPHLVFFTLRPIKAGE 596
            ..|      |....||....|:...|:||||:||     |.::..:| .|..:|.|..|.|:.||
  Fly  1446 LHL------DGGLVIDGQRMGSDCRFVNHSCEPN-----CEMQKWSVNGLSRMVLFAKRAIEEGE 1499

  Fly   597 ELSFDY---IRADNEDVPYENLSTAVRVECRCGADNCRKVL 634
            ||::||   :...:|..|           |||....||.|:
  Fly  1500 ELTYDYNFSLFNPSEGQP-----------CRCNTPQCRGVI 1529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359 9/46 (20%)
CHROMO 217..268 CDD:237991 5/50 (10%)
PreSET 362..455 CDD:128744 21/141 (15%)
SET 477..609 CDD:214614 46/137 (34%)
ash1NP_001246834.1 AWS 1340..1388 CDD:197795 13/60 (22%)
SET 1392..1512 CDD:214614 45/131 (34%)
Bromo_ASH1 1680..1787 CDD:99955
PHD_ASH1L 1858..1900 CDD:277023
BAH_polybromo 1929..2073 CDD:240068
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467616
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.