DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and suv39h1b

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001119954.1 Gene:suv39h1b / 326906 ZFINID:ZDB-GENE-030131-5105 Length:421 Species:Danio rerio


Alignment Length:420 Identity:159/420 - (37%)
Similarity:212/420 - (50%) Gaps:82/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 QPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTELEKQLEALPLMENI 297
            |.::.|||.||.:|.||||...|:.....:.:|                                
Zfish    67 QELYLVKWKGYPESRNTWEPRRNLRCVNLLSQF-------------------------------- 99

  Fly   298 TVAEVDAYEPLNLQIDLILLAQYRAAGSRSQREPQKIGERALKSMQIKRAQFVRRKQLAD-LALF 361
                   :|.||.::               ||:.::...|.|....:  ....:|.:|.. |..:
Zfish   100 -------WEDLNAEM---------------QRQNKRSAPRRLDPATV--THLTQRAKLRQTLKQW 140

  Fly   362 EKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNIIGKDVPKPEAGIVGCKCTEDTEECTAS-- 424
            |..:|.:......|.|.|.:||:....:|.||:|..:|..:...|.. |||:||    :|.||  
Zfish   141 ETHLNSLGTHKGYISVRNQVDLEGPPKSFTYINDYKVGDGILLNEVS-VGCECT----DCLASPV 200

  Fly   425 TKCCARFAGELFAYERSTRRLRLRPGSAIYECNSRCSCDSSCSNRLVQHGRQVPLVLFKTANGSG 489
            ..|||..:...||| ....::|:|||..|||||.||.|...||||:||.|.:..|.:|:|.||.|
Zfish   201 EGCCAGASQHKFAY-NELGQVRIRPGLPIYECNKRCRCGPDCSNRVVQRGIRYSLCIFRTDNGRG 264

  Fly   490 WGVRAATALRKGEFVCEYIGEIITSDEANERGKAYDDNGRTYLFDLDYNTAQDSEYTIDAANYGN 554
            ||||....:||..||.||:|||||::||..||..||..|.||||||||   .|.|||:|||:|||
Zfish   265 WGVRTMERIRKNTFVMEYVGEIITTEEAERRGHVYDKEGATYLFDLDY---VDDEYTVDAAHYGN 326

  Fly   555 ISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDY-IRADNEDVPYENLST- 617
            ||||:||||||||.|:..:|::|:..||.:.||..|.|||||||:||| ::.|..|.....:.| 
Zfish   327 ISHFVNHSCDPNLQVYNVFIDNLDERLPRIAFFATRGIKAGEELTFDYNMKIDPVDAESTKMDTN 391

  Fly   618 ------------AVRVECRCGADNCRKVLF 635
                        .:||||:||...|||.||
Zfish   392 FGVMGLPGSPKKRMRVECKCGVATCRKYLF 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991 13/34 (38%)
PreSET 362..455 CDD:128744 32/94 (34%)
SET 477..609 CDD:214614 77/132 (58%)
suv39h1bNP_001119954.1 Chromo 46..101 CDD:278797 13/72 (18%)
Pre-SET 146..244 CDD:282838 39/103 (38%)
SET <181..421 CDD:225491 122/248 (49%)
SET 252..375 CDD:214614 75/125 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576221
Domainoid 1 1.000 153 1.000 Domainoid score I4253
eggNOG 1 0.900 - - E2759_KOG1082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 260 1.000 Inparanoid score I3105
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D589939at33208
OrthoFinder 1 1.000 - - FOG0001837
OrthoInspector 1 1.000 - - otm24676
orthoMCL 1 0.900 - - OOG6_100876
Panther 1 1.100 - - LDO PTHR46223
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R211
SonicParanoid 1 1.000 - - X219
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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