DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Su(var)3-9 and CG32808

DIOPT Version :10

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_726740.1 Gene:CG32808 / 318221 FlyBaseID:FBgn0052808 Length:284 Species:Drosophila melanogaster


Alignment Length:189 Identity:40/189 - (21%)
Similarity:67/189 - (35%) Gaps:69/189 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 ILLAQYRAAGSRSQREPQKIGERAL--KSMQIKR--AQFV------RRKQLADLALFE------- 362
            :|.|.:...||..::...:.|.:.|  .|.|:.|  |.||      ..|.:.|:||.:       
  Fly    67 VLTAAHCVRGSSPEQLDLQYGSQMLARNSSQVARVAAIFVHPGYEPEDKYVNDIALLQLAQSVAL 131

  Fly   363 -KRMNHVEKPSP-----------------------------PIRVENNIDLDTIDSNFMYIHDNI 397
             |.:..|..|.|                             .::::...|.:..:.:..|:||:.
  Fly   132 SKFVQPVRLPEPRQVTPGNASAVLAGWGLNATGGVVQQHLQKVKLQVFSDTECSERHQTYLHDSQ 196

  Fly   398 IGKDVPKPEAGIVGCKCT-----------EDTEE--CTASTKCCAR--FAG---ELFAY 438
            |...:|:...|    :|:           .||:.  .:.|.|.|||  |.|   |:.||
  Fly   197 ICAGLPEGGKG----QCSGDSGGPLLLIGSDTQVGIVSWSIKPCARPPFPGVFTEVSAY 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 PTZ00327 11..>80 CDD:240362
Chromo 219..268 CDD:459793
SET_SUV39H 388..634 CDD:380940 19/69 (28%)
CG32808NP_726740.1 Tryp_SPc 30..258 CDD:238113 40/189 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.