DRSC/TRiP Functional Genomics Resources

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Protein Alignment Su(var)3-9 and set-21

DIOPT Version :9

Sequence 1:NP_524357.2 Gene:Su(var)3-9 / 41483 FlyBaseID:FBgn0263755 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_500555.2 Gene:set-21 / 177204 WormBaseID:WBGene00021282 Length:568 Species:Caenorhabditis elegans


Alignment Length:475 Identity:102/475 - (21%)
Similarity:168/475 - (35%) Gaps:141/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VVERI-ECVEMDQYQPVFFVKWLGYHDSENTWESLANVADCAEMEKFVERHQQLYEIYIAKITTE 283
            ::||| :..|::.|..        |.::||        .|.....:|:.:     .|.:|:....
 Worm   128 LLERIRDDPELNTYYE--------YQETEN--------KDLGRCMRFIAQ-----RIVMARTNNN 171

  Fly   284 LEKQLEALPLMENITVAEV---------DAYEPLNLQIDLILLAQYRAAGSRSQREPQKI----- 334
            |.|.|    |.|..|..|:         .||||...:|        |...:.:..|...|     
 Worm   172 LMKHL----LAEQGTSTEITPESLQEYFPAYEPPKNRI--------RIKSNLTFNENDVIPVYSD 224

  Fly   335 --GERALKSMQIKRAQFVRRKQLADLALFEKRMNHVEKPSPPIRVENNIDLDTIDSNFMYIHDNI 397
              || .|:|::|                            |.....:..|::.:|   .:...|:
 Worm   225 LEGE-TLESLEI----------------------------PVTLTYDYTDVNMVD---QFTEPNL 257

  Fly   398 IGKDVPKPEAG--IVGCKC--TEDTEECTASTKC-C----ARFAGELFAYER----STRRLRLRP 449
            ....:...|.|  ::.|.|  ::....|..:.|| |    .|..|  |...|    .|.....:|
 Worm   258 TKAIIMSEENGENMIRCTCCSSKPIVPCYENEKCPCFIMNQRMQG--FQIPREGCGKTEFTSFKP 320

  Fly   450 -----------GSAIYECNSRCSCDSSCSNR--LVQHGRQVPLVLFKTANGSGWGVRAATALRKG 501
                       ..|.:.|:..|.|...|:|.  |:.|.:..||.:::.....|:.||:...:..|
 Worm   321 IYFFNPKDHYYDHAGFACSELCGCGGKCTNNSMLLPHKKLFPLEIYRNDPAVGFVVRSTVMIPAG 385

  Fly   502 EFVCEYIGEII--TSDEANERGKAYDDNGRTYLFDLDY-----NTAQDSEYT------------I 547
            ..:.|:.|||:  .:.|.:.|..||.   .||..|:.:     ......|||            |
 Worm   386 TPLMEFTGEIVELKNMELDNRDYAYQ---ITYSDDVKFRRLLQEVKFSKEYTKLLEKLSRKRFFI 447

  Fly   548 DAANYGNISHFINHSCDPNLAVFPCWIEHLNVALPHLVFFTLRPIKAGEELSFDYIRADNEDVPY 612
            |...:||::..:.|:|.||:.|...:.:.|:.|..|||..||..:.....|:.||         .
 Worm   448 DPKIHGNVARTVGHACAPNMEVVRVFQKSLSPAHLHLVLVTLEDVFPSVPLTIDY---------G 503

  Fly   613 ENLSTAVRVECRCGADNCRK 632
            :..:..::..|||....||:
 Worm   504 KTYTDVLKDRCRCRTFACRR 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Su(var)3-9NP_524357.2 P-loop_NTPase 41..>80 CDD:304359
CHROMO 217..268 CDD:237991 10/48 (21%)
PreSET 362..455 CDD:128744 19/116 (16%)
SET 477..609 CDD:214614 39/150 (26%)
set-21NP_500555.2 SET <336..503 CDD:394802 46/178 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165832
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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