DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17404 and CG7142

DIOPT Version :10

Sequence 1:NP_650165.2 Gene:CG17404 / 41482 FlyBaseID:FBgn0038001 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_650703.1 Gene:CG7142 / 42194 FlyBaseID:FBgn0038595 Length:334 Species:Drosophila melanogaster


Alignment Length:269 Identity:86/269 - (31%)
Similarity:124/269 - (46%) Gaps:51/269 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TPHRIVGGADIPPGEHVPYQVSLQYRTRG-GQMHFCGGSIIAPNRILTAAHCCQGLNASRMSV-V 93
            |||            ..||.||:|..|.. |.:|:|.|:||..:.|||||||.....|...|| |
  Fly    87 TPH------------SAPYVVSIQMMTPDQGLVHYCAGTIINEHWILTAAHCLSSPQAVENSVIV 139

  Fly    94 AGIRGL-NEKGSRSQV----LSYSI-HPKYQELVTS-DLAVLSIKPPLKLNN----STISAIEYR 147
            ||...: ::||..|.:    :.|.: |..|...|.. |:|::..|.||..:.    :|:...:.:
  Fly   140 AGSHDIHDQKGEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTKEPLVFDTYVQPATLPEQDAQ 204

  Fly   148 SQGKDFVGGGVPVTLTGWGLRLPVPFPFLDNVNYPNVLQRMSYHTISNSECRNAGMES---VTDT 209
            .:|..        ||.|||.......|     |||:.||..:...:....|......|   :.:|
  Fly   205 PEGYG--------TLYGWGNVSMTAVP-----NYPHRLQEANMPILDMELCEQILARSGLPLHET 256

  Fly   210 EICARGPFRGA---CSGDSGGPLVME-SKNGLQQ----VGIVSYGLVVCGLYISPDVYTRVSTFS 266
            .:|. ||..|.   |:.||||||:.: .:...:|    :||||:|.:.||...:|.|:.|||.|:
  Fly   257 NLCT-GPLTGGVSICTADSGGPLIQQCCEEHFEQANIVIGIVSWGKMPCGQKNAPSVFVRVSAFT 320

  Fly   267 DWIGNQTKS 275
            :|| ||..|
  Fly   321 EWI-NQVIS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17404NP_650165.2 Tryp_SPc 34..269 CDD:214473 78/258 (30%)
CG7142NP_650703.1 Tryp_SPc 84..326 CDD:238113 84/265 (32%)

Return to query results.
Submit another query.