DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17404 and CG18478

DIOPT Version :10

Sequence 1:NP_650165.2 Gene:CG17404 / 41482 FlyBaseID:FBgn0038001 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster


Alignment Length:267 Identity:71/267 - (26%)
Similarity:105/267 - (39%) Gaps:57/267 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PYQVSLQYRTRGGQ------------MH----FCGGSIIAPNRILTAAHCCQGLNASRMSVVAGI 96
            |..|.:|:....||            :|    ..|||:|.|:.:|||||.....:...:.|.||.
  Fly    36 PDAVKVQFNVTEGQAKPAEFPWTIAVIHNRSLVGGGSLITPDIVLTAAHRIFNKDVEDIVVSAGE 100

  Fly    97 RGLNEKGSRSQ--------VLSYSIHPKYQ-ELVTSDLAVLSIKPPLKLNNSTISAIEYRSQGKD 152
            .   |.||..:        ||...||..:. :...::||:|.:.....|... |:.|...:|.:.
  Fly   101 W---EYGSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYK-INTICLPTQKRS 161

  Fly   153 FVGGGVPVTLTGWGLRLPVPFPFLDNVNYPNVLQRMSYHTISNSECRNAGMESVTDTE------- 210
            .  ......:.|||     .:.|.| .:|..||:::....:....|:    :.:..|.       
  Fly   162 L--SSTRCIVAGWG-----KYQFSD-THYGGVLKKIDLPIVPRHICQ----DQLRKTRLGQNYTL 214

  Fly   211 ----ICARG-PFRGACSGDSGGPL---VMESKNGLQQVGIVSYGLVVCGLYISPDVYTRVSTFSD 267
                |||.| ....||:||.||.|   :.|.....:|:|||::| |.|.....|..||.|..|..
  Fly   215 PRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQIGIVNWG-VGCKEKNVPATYTDVFEFKP 278

  Fly   268 WIGNQTK 274
            ||..|.|
  Fly   279 WIVQQIK 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17404NP_650165.2 Tryp_SPc 34..269 CDD:214473 67/260 (26%)
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 62/246 (25%)

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