DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17404 and CG30088

DIOPT Version :10

Sequence 1:NP_650165.2 Gene:CG17404 / 41482 FlyBaseID:FBgn0038001 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:271 Identity:70/271 - (25%)
Similarity:108/271 - (39%) Gaps:77/271 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RIVGGADIPPGEHVPYQVSLQYRTRGGQMHFCGGSIIAPNRILTAAHC----------------- 81
            |||.|.:... :..|:...|.|   ..::| |||:||:...|||||||                 
  Fly    44 RIVRGKEAML-KSAPFMAYLYY---SSEIH-CGGTIISSRYILTAAHCMRPYLKVRLGEHDITRN 103

  Fly    82 --CQGLNASRMSVVAGIRGLNEKGSRSQVLSYSIHPKYQELVTSDLAVLSIKPPLKLN------- 137
              |||.:.|            .......::..:.:.::...:.:|:|:|.:...::.|       
  Fly   104 PDCQGGSCS------------PPAEEFDIVLATKYKRFDRFLANDIALLKLSRNIRFNVHIQPIC 156

  Fly   138 ---NSTISAIEYRSQGKDFVGGGVPVTLTGWGLRLPVPFPFLDNVNYPNVLQRMSYHTISNSECR 199
               |...:...:..|.            .|||.        .:..:..||||........|..||
  Fly   157 LILNPAAAPNVHEFQA------------FGWGQ--------TETNHSANVLQTTVLTRYDNRHCR 201

  Fly   200 NAGMESVTDTEICARGPFRGA--CSGDSGGPLVME-SKNGL---QQVGIVSYGLVVCGLYISPDV 258
            :.....:|..::|.  .|:|:  ||||||||||.: :.:|:   .|:||||:|...|.   ||.|
  Fly   202 SVLSMPITINQLCV--GFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQ---SPGV 261

  Fly   259 YTRVSTFSDWI 269
            ||.|..:..||
  Fly   262 YTYVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17404NP_650165.2 Tryp_SPc 34..269 CDD:214473 68/269 (25%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 69/270 (26%)

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