DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rsbp15 and Ropn1l

DIOPT Version :9

Sequence 1:	NP_650164.1	Gene:	Rsbp15 / 41481	FlyBaseID:	FBgn0038000	Length:	421	Species:	Drosophila melanogaster
Sequence 2:	NP_001178015.1	Gene:	Ropn1l / 685646	RGDID:	1591367	Length:	218	Species:	Rattus norvegicus

Alignment Length:	217	Identity:	49/217 - (22%)
Similarity:	76/217 - (35%)	Gaps:	67/217 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    13 QAINVPEGLPELLSDVTREVLRCQPKKECLCQFIIDYLHSV-------IVTREKAMVAKTILDRS 70
            |.|::|..||::|...|:..:|.||..  :.|:...|..::       :..|.:..||....|..
  Rat    11 QQIHIPPELPDILKQFTKAAIRTQPAD--VLQWSAGYFSALSRGDPLPVKDRIEMPVATQKTDTG 73

  Fly    71 LRQ-VDSIISDLC-------VCDLSKEKSELMGQVLEDCFRNFLEKRRCEMRRGKQAIKFEDVDI 127
            |.| :..::...|       :.||.|:...|       |..  :||.|.          ..|:|.
  Rat    74 LTQGLLKVLHKQCSHKQYVELADLEKKWKNL-------CLP--VEKFRA----------IVDLDP 119

  Fly   128 LEELLQKCKF------------------------TDEELVMSRPAIES-AYKRFVDAYMSA---E 164
            .|:.::..||                        :|.|...:|...|: ||   :..|:||   |
  Rat   120 SEDKMEWIKFLALGCSSLGGTLNTAMKNVCEILTSDPEGGPARIPFETFAY---IYQYLSALDPE 181

  Fly   165 RGADGTELLYQYFRDRELKRIN 186
            ..|..||......||....|.|
  Rat   182 FSAVETETYLANLRDTSESRKN 203

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rsbp15	NP_650164.1	DD_R_PKA	17..57	CDD:295380	10/46 (22%)
Rsbp15	NP_650164.1	IQ	190..210	CDD:197470
Ropn1l	NP_001178015.1	DD_R_PKA	15..51	CDD:413389	10/37 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR14952
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100