DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsbp15 and Pkd1l3

DIOPT Version :10

Sequence 1:NP_650164.1 Gene:Rsbp15 / 41481 FlyBaseID:FBgn0038000 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_017168310.1 Gene:Pkd1l3 / 244646 MGIID:2664670 Length:2206 Species:Mus musculus


Alignment Length:197 Identity:48/197 - (24%)
Similarity:77/197 - (39%) Gaps:42/197 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 DPCAEPTEPTEVDASSSPDTAKDGYDDVNLSTVP-----TTAAITAGP-----TPLPTAPGTV-- 309
            |..|..:.|....|:|:..:...|..|...|:.|     .|:|.::.|     ||..::|..|  
Mouse   245 DTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASSSPPQGTSDTPASSSPPQVTS 309

  Fly   310 -------PPSAPGTAPATAR----TSATAIAEPEAHEEAAEAQPAEEAPAAEAPADEAAPAPAEE 363
                   ||......||::.    ||||:.:       ::..|...:.||:.:|.......|:..
Mouse   310 ATSASSSPPQGTSDTPASSSPPQVTSATSAS-------SSPPQGTSDTPASSSPPQGTLDTPSSS 367

  Fly   364 AAP-----PPAEEAAPE-AAEEPAPPPPPEEAAAPP----PPAEEPAPTEGAAPP--AEEAPAEE 416
            :.|     .||..:.|: .:|.||...||:..:..|    ||....|....::||  ..|.||..
Mouse   368 SPPQGTSDTPASSSPPQGTSETPASNSPPQGTSETPGFSSPPQVTTATLVSSSPPQVTSETPASS 432

  Fly   417 AP 418
            :|
Mouse   433 SP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsbp15NP_650164.1 DD_RII_PKA-like 17..52 CDD:438517
IQCD 187..>210 CDD:467745
PLN03209 <221..326 CDD:178748 22/91 (24%)
Pkd1l3XP_017168310.1 CLECT 37..142 CDD:153057
PHA03307 147..>513 CDD:223039 48/197 (24%)
Herpes_BLLF1 <347..705 CDD:282904 23/88 (26%)
GPS 1041..1079 CDD:460350
PLAT_polycystin 1151..1269 CDD:238850
Polycystin_dom 1729..1914 CDD:466668
PKD_channel 1919..2139 CDD:462341
Blue background indicates that the domain is not in the aligned region.

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