DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and ydiO

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_416210.4 Gene:ydiO / 945626 ECOCYCID:G6918 Length:383 Species:Escherichia coli


Alignment Length:380 Identity:119/380 - (31%)
Similarity:194/380 - (51%) Gaps:8/380 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ALSETHQILQKTCREFANAELAPK-ARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQ 99
            :|:|..::|..:.||........: .|..|:...||.|.:|.|.:.|:..:.|.||:||...||.
E. coli     4 SLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYV 68

  Fly   100 AYAIGMEEVARGDAAVSIVMGVNNLYLGAVQQHGT-EQQKQDFLVPYTQGEHIAFYALSEPGNGS 163
            ...:.:.||::..|...::  .|...:.::::.|: ||.::........|:.....||:|||.||
E. coli    69 TQMLALMEVSKCGAPAFLI--TNGQCIHSMRRFGSAEQLRKTAESTLETGDPAYALALTEPGAGS 131

  Fly   164 DAGAASTTAKLQGDSYQINGTKAWISNSKEASGGIVFATVDKSMK--HKGITAFLTPKDVPGLSI 226
            |..:|:||...:.....|||.|.:|:.:||....:|.|. |...|  .|..|.:......||:.|
E. coli   132 DNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLAR-DPQPKDPKKAFTLWWVDSSKPGIKI 195

  Fly   227 AKKESKMGMRATSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALEL 291
             ....|:|....|||::.|::|.|..|.::|..|.||...|.:.:..|:..||::||.|:.|.|.
E. coli   196 -NPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFED 259

  Fly   292 AVDYSQKRVAFGKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASE 356
            |..|:.:|:||||.:...|:||:|||.||.:::..|.:..:.||..|....:...||:|||:.:.
E. coli   260 AARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCAR 324

  Fly   357 SATFCAHQCIQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRE 411
            :|.......|||:||:|||.:.....::|:.|...|..||.||...|....:|::
E. coli   325 TAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKD 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 117/374 (31%)
ydiONP_416210.4 PRK12341 1..381 CDD:183454 119/380 (31%)

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