DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4860 and acad9

DIOPT Version :9

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001038772.1 Gene:acad9 / 724002 ZFINID:ZDB-GENE-060616-196 Length:630 Species:Danio rerio


Alignment Length:439 Identity:151/439 - (34%)
Similarity:225/439 - (51%) Gaps:35/439 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RVARTLGQRSSGAWSARIIAGGNRGIACL---------------------AALSETHQILQKTCR 49
            |||:| |:......|.|.|...:|.:|..                     ..|.|.:|.:|...:
Zfish    23 RVAQT-GEYLYQFQSQRFIRSSSRSLAYAKDLFLGKVNKKEVFPYPEISNEELEELNQFVQPVEK 86

  Fly    50 EFANAELAPKARHHDREELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAA 114
            .|..:..:.|.   |||...|.|.:..|.||||..:.:.|||||.||....|| .:.|:...|.:
Zfish    87 FFNESVDSAKI---DREANIPPETLDGLKELGLFGIQIPEEYGGLGLSNTMYA-RLGEITSLDGS 147

  Fly   115 VSIVMGVNN-LYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKL--QG 176
            :::.:..:. :.|..:...||:.||..:|.....|||||.:.|:|||:||||.:....|.|  .|
Zfish   148 IAVTLAAHQAIGLKGILIAGTDAQKAKYLPKLATGEHIAAFCLTEPGSGSDAASIQLRATLTEDG 212

  Fly   177 DSYQINGTKAWISNSKEASGGIVFA---TVDK-SMKHKGITAFLTPKDVPGLSIAKKESKMGMRA 237
            ..|.:||||.||||...|....|||   .||| ..|...||||:..:...|::..|.|.|:|:|.
Zfish   213 KHYLLNGTKFWISNGGWADIMTVFARTEVVDKDGQKKDKITAFIVERAFGGVTSGKPEDKLGIRG 277

  Fly   238 TSTCQLVLEDVHVPRSRVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAF 302
            ::|.::..||..||...|:|..|||||:||..|:.||..:.....|:.:..:||:.:|:..|..|
Zfish   278 SNTTEITFEDTKVPIENVIGEVGDGFKVAMNILNNGRFSMGGAGAGVVKKLIELSAEYAGTRKQF 342

  Fly   303 GKHLARLQLIQQKLADMATRVEISRLLTWRAAWLKDN-GLP-ITKEAAMAKLHASESATFCAHQC 365
            .:.|:...:||.|.|.||..|.:...:.:..|.:.|. ||| .:.||||.|:.:||....|..:.
Zfish   343 NRRLSEFGMIQDKFATMALNVYVMESMAYLTAGMMDRPGLPDCSLEAAMVKVFSSEGTWICVSEA 407

  Fly   366 IQILGGMGYTTDLPAELYYRNARVTEIYEGTSEIQRIVIANAVLRELGK 414
            :|:|||:|:|.:.|.|.|.|:.|:.:|:|||:||.|:.:|...::..||
Zfish   408 LQVLGGLGFTKNYPYERYLRDCRILQIFEGTNEILRMYVALTGMQHAGK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 CaiA 37..414 CDD:224871 139/385 (36%)
SCAD_SBCAD 39..410 CDD:173847 138/379 (36%)
acad9NP_001038772.1 CaiA 75..447 CDD:224871 137/375 (37%)
VLCAD 48..455 CDD:173850 140/410 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.