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Protein Alignment CG4860 and Ivd

DIOPT Version :9

Sequence 1:	NP_650163.2	Gene:	CG4860 / 41480	FlyBaseID:	FBgn0037999	Length:	415	Species:	Drosophila melanogaster
Sequence 2:	NP_062800.1	Gene:	Ivd / 56357	MGIID:	1929242	Length:	424	Species:	Mus musculus

Alignment Length:	414	Identity:	157/414 - (37%)
Similarity:	227/414 - (54%)	Gaps:	16/414 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 RTLGQRSSGAWSAR----IIAGGNRGIACLA------ALSETHQILQKTCREFANAELAPKARHH 63
            |.||:|.| :|..|    .:|...|..:.|.      .|:|..:.|:.|..:|....|||||:..
Mouse     6 RLLGRRVS-SWRLRPSPSPLAVPRRAHSILPVDDDINGLNEEQKQLRHTISKFLQENLAPKAQEI 69

  Fly    64 DREELYP--AEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGV-NNLY 125
            |:...:.  .|..::||.||::.:|...:||||||.|..:.:.|||::|...||.:..|. :||.
Mouse    70 DQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLC 134

  Fly   126 LGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISN 190
            :..:.::|.|.||:.:|.....||.|...|:|||..|||..:....|:.:||.|.:||.|.||:|
Mouse   135 VNQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITN 199

  Fly   191 SKEASGGIVFATVDKSM--KHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRS 253
            ..:|...:|:|..|.:.  ..:|||||:..|.:||.|.:||..|:|||.::||:||.||..||.:
Mouse   200 GPDADILVVYAKTDLTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCKVPAA 264

  Fly   254 RVLGAAGDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLAD 318
            .||.....|..:.|..||..|:.:|....||.||.|:..:.|...|.|||:.:.:.||:|.|:||
Mouse   265 NVLSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMAD 329

  Fly   319 MATRVEISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELY 383
            |.||:..||...:..|...|.|..|.|:.|...|:|:|.||..|...||.|||.||..|.|...:
Mouse   330 MYTRLMASRQYVYNVAKACDEGHIIPKDCAGVILYAAECATQVALDGIQCLGGNGYINDFPMGRF 394

  Fly   384 YRNARVTEIYEGTSEIQRIVIANA 407
            .|:|::.||..||||::|:||..|
Mouse   395 LRDAKLYEIGAGTSEVRRLVIGRA 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.