DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4860 and acox3

DIOPT Version :10

Sequence 1:NP_650163.2 Gene:CG4860 / 41480 FlyBaseID:FBgn0037999 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_998312.2 Gene:acox3 / 406421 ZFINID:ZDB-GENE-040426-2163 Length:708 Species:Danio rerio


Alignment Length:324 Identity:75/324 - (23%)
Similarity:120/324 - (37%) Gaps:85/324 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 VNNLYLGAVQQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDS--YQIN- 182
            :|....||...:...|:...|:....:......::|:|..:||:..|..||||...::  :.|| 
Zfish   131 LNKGMFGATVLNTGSQRHLKFVKDIERMMTFGCFSLTELSHGSNTRALRTTAKYDPNTQEFVINS 195

  Fly   183 ----GTKAWISN-SKEASGGIVFA---TVDKSMKHKGITAFLT----PKD---VPGLSIAKKESK 232
                ..|.|:.| .|.|:..:|||   |.|.  |..|:.:|:.    ||.   :||:.:.....|
Zfish   196 PDFEAAKFWVGNLGKTATHSVVFAQLYTPDG--KCHGLHSFIVQVRDPKTLLAMPGVMVGDMGKK 258

  Fly   233 MGMRATSTCQLVLEDVHVPRSRVLGAAGD----------------GFKIAMQSLDCGRIGIAAQA 281
            :|.........|..:|.:||..:|...||                .|..::.:|..||:||...|
Zfish   259 LGQNGLDNGFAVFHNVRIPRENLLNKTGDVAPDGQYVSPFKDPNKRFGASLGALSGGRVGITRMA 323

  Fly   282 TGIAQAALELAVDYSQKRVAFG-KHLARLQLIQQKLADMATRVEISRLLTWRAA----------- 334
            ....:.|:.:||.:|..|..|| |....:.:::.:|...       ||:.:.||           
Zfish   324 LVNLKLAVTVAVRFSATRRQFGPKEDEEIPVLEYQLQQW-------RLIPFLAAVYALEHFTKSF 381

  Fly   335 -----------WLKDNGLPITKEAAMAKLHASESATFCA-------------HQCIQILGGMGY 374
                       .:||      |....|:|.....|..||             .:|.:..||.||
Zfish   382 SRNFVEFQMGLLMKD------KSDRQAELGREIHALSCASKPLGSWTAQRGIQECREACGGHGY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4860NP_650163.2 SCAD_SBCAD 39..410 CDD:173847 75/324 (23%)
acox3NP_998312.2 AXO 27..680 CDD:173839 75/324 (23%)

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